Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03322 and BPUM_1962
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence pep-align/BSNT_03322___yppC.1.24716.seq
# -bsequence pep-align/BPUM_1962___yppC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03322___yppC-BPUM_1962___yppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03322___yppC-BPUM_1962___yppC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03322___yppC
# 2: BPUM_1962___yppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 209/321 (65.1%)
# Similarity: 251/321 (78.2%)
# Gaps: 6/321 ( 1.9%)
# Score: 1133.0
#
#
#=======================================
BSNT_03322___ 1 --MQEQQTIRKLLSRIERQTKIKNADNISRTNAYKAFYDRHPEIKWSLLA 48
.||:..|.: .|.|:||:||.||::||||||.|||||||:||||||
BPUM_1962___y 1 MLSQEEHIITQ---HILRETKVKNKDNLTRTNAYKRFYDRHPEMKWSLLA 47
BSNT_03322___ 49 SFVSRNAGWSMTDLKGSLFQLGLRERQQEWFFLAYERANWLIFSDAYPQL 98
||||||||||||||||.||..||.:::...||.|||||||||||||||||
BPUM_1962___y 48 SFVSRNAGWSMTDLKGELFHPGLTDQEGHLFFTAYERANWLIFSDAYPQL 97
BSNT_03322___ 99 LLYHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINE 148
|||.||||.||||||||..|.||:|||.||.|||.:|:||||:|||||||
BPUM_1962___y 98 LLYEWSKRCGKPLFHLLPYFSVSRFMSTEWERFWLKRDTERLLYALIINE 147
BSNT_03322___ 149 QNTIQTPIIQNPSFKKNVFDTIPFYLSDWLHFNTVIFPSSNGFLYGISVK 198
|.|||:||||||..|||||.:|.:..|:|.||.||:||:.:|.|||::::
BPUM_1962___y 148 QYTIQSPIIQNPLLKKNVFHSIQYLFSEWGHFQTVVFPTVDGHLYGLTIR 197
BSNT_03322___ 199 RFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGSRFDMEKMIGI 248
:||..:|||.|||:|::|||:.:|||.||||||||||||||||.|..:||
BPUM_1962___y 198 KFSNVKERITLGKKLAKLLFRADLFSDFYHFLHTVPHTGSRFDFEPFLGI 247
BSNT_03322___ 249 TKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDW 298
.:|::|.|||.||.:.||||..:.|||..|:..|.|..|.||||||||||
BPUM_1962___y 248 ARRSTPFLRTVYPVMTHSLDDQREDWFQKKLSPTLFDEETLPKQIELTDW 297
BSNT_03322___ 299 YLHKKRQLHALFAVEQW-LKK 318
|.||||||..||::|.: |.|
BPUM_1962___y 298 YFHKKRQLRFLFSLEHYFLHK 318
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