Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03263 and BPUM_1923
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03263___ypgR.1.24716.seq
# -bsequence pep-align/BPUM_1923___ypgR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03263___ypgR-BPUM_1923___ypgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03263___ypgR-BPUM_1923___ypgR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03263___ypgR
# 2: BPUM_1923___ypgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 275/378 (72.8%)
# Similarity: 316/378 (83.6%)
# Gaps: 1/378 ( 0.3%)
# Score: 1426.0
#
#
#=======================================
BSNT_03263___ 1 MKIKSIEPTPSPNTMKVILTEELPAGKSNNYKPEQAEGAPPVIEEILKID 50
|||.:||||||||||||||||.|..|||||||.:|.|.||.:|:.||.|:
BPUM_1923___y 1 MKITAIEPTPSPNTMKVILTEALAGGKSNNYKKDQKEEAPEMIKRILNIE 50
BSNT_03263___ 51 GVKGVYHVADFLAVERNARYDWKDILPQVRTAFGMESAESGEENRSDQES 100
||||||||||||||||||::||:.||.|||.|||.::....|.::|..::
BPUM_1923___y 51 GVKGVYHVADFLAVERNAKFDWQGILQQVREAFGQQTEGLQEGSQSGGDT 100
BSNT_03263___ 101 FGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQQAILKLRSEASNVV 150
|||||||||||:||||||||||||||||||:|||||.|||||||.:.|||
BPUM_1923___y 101 FGEVKVFVQMFNGIPMQVKLTDGEREERFGMPERFQAAILKLRSSSDNVV 150
BSNT_03263___ 151 FERAWKEQGVRFGDFDEIGHDVTEELQAAYSDERLKRLTEAAAQGKGEAK 200
|||.|||.|||||||.:||.:|.|||||||.||||.|||||..:|:....
BPUM_1923___y 151 FERVWKEHGVRFGDFADIGQEVREELQAAYDDERLARLTEAVKEGQEAVD 200
BSNT_03263___ 201 QTVQRKAYKVTLDMLDDEDWKKRYAHLEQMDPKEEDIPVLQKALDDPKVS 250
:.|.||||.||.|||.:||||||:||||||.|:::|||||.||::|||.|
BPUM_1923___y 201 RQVNRKAYDVTEDMLREEDWKKRFAHLEQMQPEQKDIPVLMKAMEDPKTS 250
BSNT_03263___ 251 IRRQAVVYLGMIETPDVLPLLYKALEDKAVSVRRTAGDCLSDIGDPQAIP 300
|||||||..||||.|.:||:|||.|:||.|:||||||||:||:|||.||.
BPUM_1923___y 251 IRRQAVVNAGMIEDPAILPILYKGLKDKTVTVRRTAGDCISDLGDPSAIE 300
BSNT_03263___ 301 AMIKSLSDSSKLVRWRAAMFLYEVGDESAIEALRAAEDDPEFEVSLQVKM 350
|||:||.|.||||||||||||||.|||:|::||:.||.||||||||||||
BPUM_1923___y 301 AMIESLKDPSKLVRWRAAMFLYEEGDETALDALKEAEQDPEFEVSLQVKM 350
BSNT_03263___ 351 ALERIEHGEEAKGSVWKQMTESRKKGE- 377
|:||||||||||||||||||||||...
BPUM_1923___y 351 AIERIEHGEEAKGSVWKQMTESRKNASE 378
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