Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01366 and BPUM_1816
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_01366___yfiB.1.24716.seq
# -bsequence pep-align/BPUM_1816___yfiB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01366___yfiB-BPUM_1816___yfiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01366___yfiB-BPUM_1816___yfiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01366___yfiB
# 2: BPUM_1816___yfiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 581
# Identity: 232/581 (39.9%)
# Similarity: 361/581 (62.1%)
# Gaps: 12/581 ( 2.1%)
# Score: 1069.0
#
#
#=======================================
BSNT_01366___ 1 MQKALSFLKPYSLLAGIALILMLTELA--VELMQPLLIAKIIDDGILKQD 48
|:..|||||||.| .:..|::||.|: ::|..|.|.|.|:|.||::.|
BPUM_1816___y 1 MKSILSFLKPYRL--SVVSIVILTFLSSMLQLYLPTLTADIVDVGIVQGD 48
BSNT_01366___ 49 LRHVWIWGAVMIGLTVLSFAAGMLNSFYAAHVSQSFSYDTRKGLFQKIQS 98
:.::|..|..|:..::|:....:..|:.::..:..|..|.|:.||..::.
BPUM_1816___y 49 IAYIWKVGGWMVACSLLAILLTIWKSYLSSKTALGFGRDMRRQLFVHVEQ 98
BSNT_01366___ 99 FSYSTFGQFSSSSYITRLTNDVTQVQNMIFMSLRFMLRAPLMIAGGIVLS 148
||...|.:..:||:|||.||||.|||::..|.|:.|.|||||:.|||:|:
BPUM_1816___y 99 FSLEEFQKIGTSSFITRSTNDVKQVQDVTIMILQMMTRAPLMLVGGIILA 148
BSNT_01366___ 149 LAVNVKLGFFLLVTIPILILFLLWVLRKGGALFRSVQKRLDQVNTIMQEN 198
::.:..|....|..:|:|..|:..|.||...||..:||:.|::|.||:|:
BPUM_1816___y 149 VSRDAVLSLIFLAALPLLGGFIYLVSRKAIPLFGQLQKKTDRLNLIMRES 198
BSNT_01366___ 199 LIAIKLIKALLRGSHEVKRFIKANTRLMEKTVSAFQLVEFTMPVLMLLMN 248
|..|::|:|..|...|.:||.:|||...:..:...:|:.:..|.::::||
BPUM_1816___y 199 LSGIRVIRAFNRVDDEKERFQEANTSYKDTGLRVNRLMAYLFPFMLIIMN 248
BSNT_01366___ 249 LCILLILWAGSYSITSGSTQVGDVVAIINYATRITGALSMFPFLIMIFTR 298
...:.|:|.|:..|.:|..:||:::|.|.||..|..||.|.....::..|
BPUM_1816___y 249 FTNIGIVWLGANRIDAGEMEVGNLIAFIQYAMMILMALIMLSMSFIMVPR 298
BSNT_01366___ 299 AKASGDRIGEVLETEGD-EREEGIIFD-RLSGQ-IEFQHVSFRYPEMDRE 345
|:||..|:.|||..|.. :..||.:.| |...| |.|:.|||.|...::.
BPUM_1816___y 299 AQASAKRMNEVLNMEPKIQDNEGTVTDLRAPAQSIRFEDVSFYYSNAEKS 348
BSNT_01366___ 346 ALRNVSFSAKPRETIAILGATGSGKSTLFQLIPRLYQPDSGRIYIDEKPV 395
|:::::|.||..||.||:|:|||||:||.||:.|.|:...|||.:|...:
BPUM_1816___y 349 AVQDITFEAKTGETTAIIGSTGSGKTTLLQLMTRFYEATEGRITLDGVDI 398
BSNT_01366___ 396 QDIPAEGLRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKHAQ 445
:|:|.|.||.|:|||.|:.:||||||.:|:.:|:::||.:::..|.:.||
BPUM_1816___y 399 RDLPQEKLRSQMGYVSQKAVLFSGTIADNVRFGRQDASDEDVWQALRTAQ 448
BSNT_01366___ 446 IHETILKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDDST 495
..|.:|:...|.|..:.|.|.|||||||||:||||||:|||:..|.|||.
BPUM_1816___y 449 AEEFVLQKDGGIDAEIDQGGSNLSGGQKQRLSIARALVRKPSFYLFDDSF 498
BSNT_01366___ 496 SALDLQTEAKL---LEAISTYHCTTLIITQKITTAMKADQILLLEDGELI 542
||||.:|:||| ||| ...|...:|:.|:|:|...:|:|::|::|::.
BPUM_1816___y 499 SALDYKTDAKLRASLEA-EKAHAALIIVAQRISTVKHSDKIIVLDEGKIA 547
BSNT_01366___ 543 EKGTHSELLSASQLYKRIYESQFGREGSESC 573
..|||.:||..:.:|:.|..||.|:|....
BPUM_1816___y 548 GIGTHEQLLKDNLVYQEIVASQEGQEVERG- 577
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