Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02235 and BPUM_1222
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence pep-align/BSNT_02235___ykoJ.1.24716.seq
# -bsequence pep-align/BPUM_1222___ykoJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02235___ykoJ-BPUM_1222___ykoJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02235___ykoJ-BPUM_1222___ykoJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02235___ykoJ
# 2: BPUM_1222___ykoJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity: 85/176 (48.3%)
# Similarity: 117/176 (66.5%)
# Gaps: 10/176 ( 5.7%)
# Score: 399.0
#
#
#=======================================
BSNT_02235___ 1 MLKKKWMVGLLAGCLAAGGFSYNAFAKENNENRQA------SSKTDALTE 44
|:||..:...|.|.|.||||:..| .|.|:.| ..|:..:::
BPUM_1222___y 1 MMKKVLVATALTGTLVAGGFTLQA----QNTNQTAHAEQVVQKKSSFVSK 46
BSNT_02235___ 45 QEAEAIAKTVVDGTVEDIDRDLYNGKEVYEVEIEKEGEDYDVYVDIHTKQ 94
::||..|..||.|.|:|:|.:...||.||||||:|.|.:|.||||..:.:
BPUM_1222___y 47 KQAEKAALKVVKGYVDDVDLERKKGKWVYEVEIKKGGFEYKVYVDAKSGK 96
BSNT_02235___ 95 ALNDPLKEKAEQVAITKEEAEEIALKQTGGTVTESKLDEDDGAYIYEMEI 144
|||||:|||.:.|.|||::||:|||.:..||||:|.||:::|.|:||:||
BPUM_1222___y 97 ALNDPVKEKKQNVKITKKQAEQIALAKVKGTVTDSDLDKENGVYLYEVEI 146
BSNT_02235___ 145 QTKQGTETEFEISAKDGRIIKQEIDD 170
.|..|.|.:||||||.|:|:|||.||
BPUM_1222___y 147 TTPNGEEVDFEISAKTGKILKQEWDD 172
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