Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02210 and BPUM_1212

See DNA alignment / Visit BSNT_02210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_02210___ykmA.1.24716.seq
#    -bsequence pep-align/BPUM_1212___ohrR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02210___ykmA-BPUM_1212___ohrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02210___ykmA-BPUM_1212___ohrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02210___ykmA
# 2: BPUM_1212___ohrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     102/148 (68.9%)
# Similarity:   119/148 (80.4%)
# Gaps:           1/148 ( 0.7%)
# Score: 500.0
# 
#
#=======================================

BSNT_02210___      1 MENKFDHMKLENQLCFLLYASSREMIKQYKPLLDKLNITYPQYLALLLLW     50
                     |.|:|:|||||||||||||||||||.|||||||::|:|||||||||||||
BPUM_1212___o      1 MTNEFEHMKLENQLCFLLYASSREMTKQYKPLLEELDITYPQYLALLLLW     50

BSNT_02210___     51 EHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISL    100
                     ||..|.||.|||.|||||||||||||||||.|||.|:||:||||||.|.|
BPUM_1212___o     51 EHGKLNVKTMGELLYLDSGTLTPMLKRMEQNGLIIRERSKEDERSVQIRL    100

BSNT_02210___    101 TEDGALLKDKAVDIPETILGLSKQSGEDLKQLKSALYTLLETLHQKN-    147
                     ||.|..||:||..||..:|..:.:|.|:||.|:::|:.||:.|.|.. 
BPUM_1212___o    101 TEYGEQLKEKATAIPFQMLSGTGRSDEELKTLRASLHELLQKLTQSKG    148


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