Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02176 and BPUM_1180

See DNA alignment / Visit BSNT_02176 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02176___ykcA.1.24716.seq
#    -bsequence pep-align/BPUM_1180___gloA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02176___ykcA-BPUM_1180___gloA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02176___ykcA-BPUM_1180___gloA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02176___ykcA
# 2: BPUM_1180___gloA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     204/318 (64.2%)
# Similarity:   244/318 (76.7%)
# Gaps:           2/318 ( 0.6%)
# Score: 1056.0
# 
#
#=======================================

BSNT_02176___      1 MKVNGIHHVSALTADAQKNLDFYKKVLGLKLVKKSVNQDEPTMYHLFYGD     50
                     ||:|||||||||||:||||:|||:::||||||||:||||:|:||||||||
BPUM_1180___g      1 MKINGIHHVSALTANAQKNVDFYRQILGLKLVKKTVNQDDPSMYHLFYGD     50

BSNT_02176___     51 EVANPGTELTFFEIPRIAPFHAGTNSISSIGLRVPSTEALHYWKERFEEQ    100
                     |||:|||||||||||.:|....|||:|:|.||.|.|.|||.:|::||||.
BPUM_1180___g     51 EVASPGTELTFFEIPMLARRLKGTNAITSTGLLVSSEEALSFWEKRFEET    100

BSNT_02176___    101 QVTHSGISKRAGRDIMAFQDHEGQRLVLTADEEGKGYGLPVKQSGIPEEF    150
                     .|.....|.|.||..:.|||.|||:|.||.:...:..|.|.....||.||
BPUM_1180___g    101 GVQQETASLRGGRPALRFQDPEGQQLFLTVEPAAQEAGSPPVHDDIPAEF    150

BSNT_02176___    151 SFRGLGPVELTVPYAEPTLHVLTNILGFTEISREPVEGQGTAVILESGEG    200
                     |.||||||||||..|:.|:.|||:||||||.:||.........|.|||.|
BPUM_1180___g    151 SIRGLGPVELTVAEADKTIRVLTDILGFTERAREQSNDGEIVTIFESGNG    200

BSNT_02176___    201 GAATEIHLIERNDLPRERQGKGSVHHVAFRVRDEEELAGWHRIISREGFS    250
                     ||.||||:||:.:.|.||.|:||||||||||.:.|||..|:..||:.||:
BPUM_1180___g    201 GAGTEIHVIEKTEGPSERSGRGSVHHVAFRVENAEELEKWYDKISKAGFT    250

BSNT_02176___    251 NSGIVERYYFKALYFREPNGILFELSTDGPGFMVDENLDELGQTIALPPY    300
                     |||:|||:||||||||||||||||:|||||||.|||.:||||..:||||:
BPUM_1180___g    251 NSGVVERFYFKALYFREPNGILFEISTDGPGFTVDEGVDELGDQLALPPF    300

BSNT_02176___    301 LEHRRAEIEAKLKPIQ--    316
                     |||:|||||.:|.|||  
BPUM_1180___g    301 LEHKRAEIEQRLTPIQSS    318


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