Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01967 and BPUM_1108

See DNA alignment / Visit BSNT_01967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01967___cotV.1.24716.seq
#    -bsequence pep-align/BPUM_1108___cotV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01967___cotV-BPUM_1108___cotV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01967___cotV-BPUM_1108___cotV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: BPUM_1108___cotV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      64/131 (48.9%)
# Similarity:    90/131 (68.7%)
# Gaps:           3/131 ( 2.3%)
# Score: 323.0
# 
#
#=======================================

BSNT_01967___      1 ---MSVQENVDTLYSKMFKELAEEHDNYIEIIDSEKITIHKSDTTFALSL     47
                        :|::|:.|.||:::..||...:|::|||.|||.:||||:|.|.||||
BPUM_1108___c      1 MKVLSIEESADLLYTQLLNELISNYDDFIEIKDSENVTIHKTDVTAALSL     50

BSNT_01967___     48 QSAVSALITVTTQLLISDSDIADIVASDLIARSTAHSRKKVKIKIINCYN     97
                     |:.|:.:||:..|||:.|.::|..:...|:|......:||..|:||||||
BPUM_1108___c     51 QATVTTIITLLIQLLVPDDELATEITDQLLATQQVTVQKKTVIQIINCYN    100

BSNT_01967___     98 ITITLSATDIMASVQLLTQTLIALITEADIL    128
                     :|||||...||.|||:|||||..|:.||.||
BPUM_1108___c    101 VTITLSDASIMNSVQILTQTLNVLLVEAGIL    131


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