Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01905 and BPUM_1062
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence pep-align/BSNT_01905___appA.1.24716.seq
# -bsequence pep-align/BPUM_1062___appA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01905___appA-BPUM_1062___appA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01905___appA-BPUM_1062___appA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01905___appA
# 2: BPUM_1062___appA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 544
# Identity: 376/544 (69.1%)
# Similarity: 454/544 (83.5%)
# Gaps: 2/544 ( 0.4%)
# Score: 2043.0
#
#
#=======================================
BSNT_01905___ 1 MKRRKTALMMLSVLMVLAIFLSAC-SGSKSSNSSAKKSAGKPQQGGDLVV 49
|.|.:.:: ::|:|::..:.|:|| ||:|:|..:.|||.|||.||||||:
BPUM_1062___a 1 MNRNRKSI-LISLLLIFTLMLAACSSGNKTSGDNEKKSTGKPVQGGDLVI 49
BSNT_01905___ 50 GSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVKLSLAESIKEL 99
|||.||||||||||||.||:|||..:||||.:||.|||.:|||||.|||.
BPUM_1062___a 50 GSIAEPTLFNSLYSTDVASSDIEERIYSFLLQTDGKLNPQLSLAEDIKES 99
BSNT_01905___ 100 DGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGSTYEML 149
|.|..:||.||||||||||:||||||||||||:|::|||.|||||.:|:|
BPUM_1062___a 100 DDGKQFDVTIKKGVKFHDGEELTADDVVFTYSIPINKDYNGERGSGFEVL 149
BSNT_01905___ 150 KSVEKKGDYEVLFKLKYKDGNFYNNALDSTAILPKHILGNVPIADLEENE 199
.||:|.|||.:.|||..||..|||..|.|..||||||||:||:.||.|||
BPUM_1062___a 150 DSVKKTGDYSIEFKLNKKDPYFYNVTLGSYGILPKHILGDVPVKDLGENE 199
BSNT_01905___ 200 FNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFEGRPYLDTVTYKVIPDAN 249
||||||||||||||.|||:|.|:||||.|||::|||||||||.|.|||.|
BPUM_1062___a 200 FNRKKPIGSGPFKFAEWKEGDYVKLEAFDDYWDGRPYLDTVTIKTIPDQN 249
BSNT_01905___ 250 AAVAQLQAGDINFFNVPATDYKTAEKFNNLKIVTDLALSYVYIGWNEKNE 299
||:|||.||||:||.||..:.:||||.:|:||.:||.|:|.|||||:|||
BPUM_1062___a 250 AAIAQLSAGDIDFFAVPGAELQTAEKISNIKIESDLGLNYSYIGWNQKNE 299
BSNT_01905___ 300 LFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDVP 349
|||.||||||||.|:||::||.|||||||:||.||||||||||||:..||
BPUM_1062___a 300 LFKSKKVRQALTHAIDRQTIVDQVLDGDGKVANIPESPLSWNYPKNDRVP 349
BSNT_01905___ 350 KFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNKVREDI 399
.||::::|||:||.|.||:||:|||.||||||||||.:||||||||||||
BPUM_1062___a 350 VFEFDQEKAKKMLKEEGWEDTDGDGYLDKDGKKFSFVIKTNQGNKVREDI 399
BSNT_01905___ 400 AVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMRWSLSTFPD 449
|||||:|||:||:|.|.||||:|||:||..||.||:||:::.|||:||||
BPUM_1062___a 400 AVVVQQQLKEIGVEAKPQIVEFSALIEQTTPPKWDYDALLLGWSLATFPD 449
BSNT_01905___ 450 QYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSKEYEQIYQK 499
||.||||||.:||||.:||||.|.|||:.|||::||||:|||.||:||:.
BPUM_1062___a 450 QYSIFHSSQSEKGLNNIWYKNKEVDKLLVDAKNLSDRKEYSKAYEKIYEL 499
BSNT_01905___ 500 IAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLEK 543
||||||||||||.|:|.|||.||:||.||||.:.|.|||||:|:
BPUM_1062___a 500 IAEDQPYTFLYYANSHRAMPSNLQGYSYHPKDEYYKIEKWWIEQ 543
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