Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01835 and BPUM_1008

See DNA alignment / Visit BSNT_01835 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01835___yisL.1.24716.seq
#    -bsequence pep-align/BPUM_1008___yisL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01835___yisL-BPUM_1008___yisL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01835___yisL-BPUM_1008___yisL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01835___yisL
# 2: BPUM_1008___yisL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      70/123 (56.9%)
# Similarity:    90/123 (73.2%)
# Gaps:           6/123 ( 4.9%)
# Score: 352.5
# 
#
#=======================================

BSNT_01835___      1 -MTHLHITTWVVALILLFVSYSLYSSGSAKGAKITHMILRLFYILIILTG     49
                      .||||||.||:.:||.||:::| :..:.|||||.|||:||.|::||.||
BPUM_1008___y      1 MGTHLHITAWVLGIILFFVAFAL-AGKNDKGAKIVHMIVRLLYLIIIATG     49

BSNT_01835___     50 AELFVR----FANWNGEYAGKMILGIITIGLMEMLLIRKKKEKSTGGLWI     95
                     .||:||    ...:.|||.|||||||:.||.|||.|:||||.||..|:.|
BPUM_1008___y     50 VELYVRTGMKIPGFGGEYIGKMILGILVIGFMEMTLVRKKKGKSVTGVLI     99

BSNT_01835___     96 GFVIVLLLTVLLGLHLPIGFQLF    118
                     ||:|..::|:||||.|||||.:|
BPUM_1008___y    100 GFIIFAIVTILLGLRLPIGFHIF    122


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