Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01601 and BPUM_0884
See
DNA alignment /
Visit
BSNT_01601 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence pep-align/BSNT_01601___glpD.1.24716.seq
# -bsequence pep-align/BPUM_0884___glpD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01601___glpD-BPUM_0884___glpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01601___glpD-BPUM_0884___glpD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01601___glpD
# 2: BPUM_0884___glpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity: 439/556 (79.0%)
# Similarity: 487/556 (87.6%)
# Gaps: 4/556 ( 0.7%)
# Score: 2325.0
#
#
#=======================================
BSNT_01601___ 1 MMKHQFSSLERDRMLTDMTKKTYDLFIIGGGITGAGTALDAASRGMKVAL 50
..||||||::||.:||||.||:|||||||||||||||||||||:|.|
BPUM_0884___g 1 ---MTFSSLEREQMLQEMTKKPYDVFIIGGGITGAGTALDAASRGMRVGL 47
BSNT_01601___ 51 SEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHV 100
:|||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0884___g 48 AEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHV 97
BSNT_01601___ 101 TTPEWMLLPFHKGGTFGSFTTSIGLRVYDFLAGVKKSERRSMLSAKETLQ 150
|||||||||.|||||||.|:|||||||||||||||.:||||||||||||.
BPUM_0884___g 98 TTPEWMLLPMHKGGTFGKFSTSIGLRVYDFLAGVKHNERRSMLSAKETLA 147
BSNT_01601___ 151 KEPLVKKDGLEGGGYYVEYRTDDARLTIEVMKEAVKFGAEPVNYSKVKEL 200
||||||||||:|||||||||||||||||||||||||||||.|||:||||.
BPUM_0884___g 148 KEPLVKKDGLKGGGYYVEYRTDDARLTIEVMKEAVKFGAEAVNYAKVKEF 197
BSNT_01601___ 201 LYEKGKAVGVLIEDVLTKKEYKVYAKKIVNATGPWVDQLREKDHSKNGKH 250
:|:|||.|||:||||:|:|.|.||||||||||||||||||:|||||.|||
BPUM_0884___g 198 IYDKGKVVGVVIEDVMTQKTYDVYAKKIVNATGPWVDQLRDKDHSKEGKH 247
BSNT_01601___ 251 LQHTKGIHLVFDQSVFPLKQAVYFDTPDGRMVFAIPREGKTYVGTTDTVY 300
|||||||||||||||||||||:||||||.|||||||||||||||||||||
BPUM_0884___g 248 LQHTKGIHLVFDQSVFPLKQAIYFDTPDKRMVFAIPREGKTYVGTTDTVY 297
BSNT_01601___ 301 KEALEHPRMTTEDRDYVINSINYMFPELNITANDIESSWAGLRPLIHEEG 350
|:.|||||||..||||||.:|.||||:||||.||:||:||||||||||||
BPUM_0884___g 298 KKQLEHPRMTKADRDYVIKAIQYMFPDLNITENDVESNWAGLRPLIHEEG 347
BSNT_01601___ 351 KDPSEISRKDEIWTSDSGLITIAGGKLTGYRKMAEHIVDLVRDRLKEEGA 400
|||||||||||:|||.||||||||||||||||||||||:||||.||||..
BPUM_0884___g 348 KDPSEISRKDEVWTSSSGLITIAGGKLTGYRKMAEHIVNLVRDGLKEETG 397
BSNT_01601___ 401 KDFGPCKTKNMPISGGHVGGSKNLMSFVTAKTKEGIAAGLSEKDAKQLAI 450
|||||||||:|||||||||||||:.:||.|||.||.|.||:|..|::||.
BPUM_0884___g 398 KDFGPCKTKHMPISGGHVGGSKNMAAFVQAKTSEGAAVGLTEPIAQKLAE 447
BSNT_01601___ 451 RYGSNVDRVFDRIEALKDEAAKRNIPVHILAEAEYSIEEEMTATPADFFV 500
:|||||..:|.|::.|:.||.||.||.::|||..|:||||:..||.|||:
BPUM_0884___g 448 KYGSNVSSLFKRVDQLQGEADKRKIPAYVLAELVYAIEEELAVTPVDFFL 497
BSNT_01601___ 501 RRTGRLFFDINWVRTYKDAVIDFMNERFQWDEQAKNKHTENLNKLLHDAV 550
||||.|.|:|||.:.|...|:|:|.|||.|||..|.|....|::|.|:||
BPUM_0884___g 498 RRTGSLLFNINWAKKYAQPVVDYMAERFGWDEAVKQKLQTELDQLFHEAV 547
BSNT_01601___ 551 VPLEQ- 555
|||:.
BPUM_0884___g 548 VPLDAE 553
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.