Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01393 and BPUM_0754
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_01393___yfiR.1.24716.seq
# -bsequence pep-align/BPUM_0754.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01393___yfiR-BPUM_0754.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01393___yfiR-BPUM_0754.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01393___yfiR
# 2: BPUM_0754
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 53/213 (24.9%)
# Similarity: 103/213 (48.4%)
# Gaps: 27/213 (12.7%)
# Score: 176.5
#
#
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BSNT_01393___ 1 MSPKVTKEHKDKRQTKILEAAKTVFKRKGFELTTMKDVVEESGFSRGGVY 50
.|:.|...|.::||.|.|:|..|||..|:|.::|..|..|:..||
BPUM_0754 1 -----MKKVKLMNQKRVLEVAATLFLEKGFAYTSMDELVRVSKVSKSNVY 45
BSNT_01393___ 51 LYFSSTEEMFRRIIETGLDEGLRKLDK--SAEHQSVWSAISIYLDELSEG 98
.:||:.||:...:::..:|.....:|. |.....|...|.::|.:||:|
BPUM_0754 46 YHFSNKEELLEGVVDYWIDMYQSAIDDVLSQNQFLVEERIQLFLKQLSQG 95
BSNT_01393___ 99 L--RDVADTLAPVQFEYLVTAWRNEERRQYLEKRYDLFV----ERFSNLL 142
: ||...: .|....|: ::..:...::::..||. ::.:.||
BPUM_0754 96 VQSRDYKGS-CPFITLYI----QSPTQATQIKEKIGLFFTGLQKKITLLL 140
BSNT_01393___ 143 QKGIDQGEFQPLQPLATIAKFFLNMNDGIIQNALYFDEEKADVSGLAESA 192
::|:|.|||:....:..:|..|:...:| ||:..|...|.:.:.::|
BPUM_0754 141 KQGVDSGEFRKTIHIDEVASLFITNLEG----ALFISETLKDATVITKTA 186
BSNT_01393___ 193 KLYLKTVLQADEK 205
. ::..:|:
BPUM_0754 187 D-HMFNLLR---- 194
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