Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05006 and BPUM_0385
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence pep-align/BSNT_05006.1.24716.seq
# -bsequence pep-align/BPUM_0385___acpD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05006-BPUM_0385___acpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05006-BPUM_0385___acpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05006
# 2: BPUM_0385___acpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 120/211 (56.9%)
# Similarity: 138/211 (65.4%)
# Gaps: 55/211 (26.1%)
# Score: 662.0
#
#
#=======================================
BSNT_05006 0 -------------------------------------------------- 0
BPUM_0385___a 1 MAKVLYITAHPHDETVSYSMATAKAFIESYKEANPSDEVVHIDLYKENIP 50
BSNT_05006 1 -----MYLAWGKLQSGTGFEELSESEKAKVGRLGELSDQFASADKYVFVT 45
::..|||||||.||:.||..|:|||.||.||||||.||||||||:
BPUM_0385___a 51 HIDADVFAGWGKLQSGAGFDTLSAEEQAKVARLNELSDQFVSADKYVFVS 100
BSNT_05006 46 PLWNFSFPPVMKAYLDSVAVAGKSFKYTEQGPIGLLTDKKAIHIQARGGY 95
||||||||||:|||:||||||||:||||||||:||||||||:||||||||
BPUM_0385___a 101 PLWNFSFPPVLKAYIDSVAVAGKTFKYTEQGPVGLLTDKKALHIQARGGY 150
BSNT_05006 96 YSEGPAAEMEMGHRYIGIMMNFFGVPSFEGIFVEGHNAEPDKAQQIKEDA 145
|:||||||:|.||||:|.:.:|||:|||||:.||||||||.||:|||.||
BPUM_0385___a 151 YTEGPAAELEAGHRYLGTIASFFGIPSFEGLIVEGHNAEPAKAEQIKADA 200
BSNT_05006 146 IARAKEAGKTF 156
|.|||..||||
BPUM_0385___a 201 IERAKALGKTF 211
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