Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00567 and BPUM_0299

See DNA alignment / Visit BSNT_00567 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_00567___ycgL.1.24716.seq
#    -bsequence pep-align/BPUM_0299___ycgL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00567___ycgL-BPUM_0299___ycgL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00567___ycgL-BPUM_0299___ycgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00567___ycgL
# 2: BPUM_0299___ycgL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     152/286 (53.1%)
# Similarity:   200/286 (69.9%)
# Gaps:          30/286 (10.5%)
# Score: 831.0
# 
#
#=======================================

BSNT_00567___      1 MKSRRISSGGFFLQTAGMRTDWRRIDMKQRIIDELKRIEQSYGVKIVYAV     50
                                               |::||.:|||.||::|.|||..||
BPUM_0299___y      1 --------------------------MRERIKEELKIIEETYDVKICLAV     24

BSNT_00567___     51 ESGSRAWGFPSQDSDYDVRFIYVPKKEWYFSIEQERDVIEEPIHDLLDIS    100
                     |||||||||||.||||||||:|||:||||:::|:.|||||.||.|:||||
BPUM_0299___y     25 ESGSRAWGFPSTDSDYDVRFLYVPRKEWYWAMEEHRDVIERPIDDVLDIS     74

BSNT_00567___    101 GWELRKTLRLFKKSNPPLLEWLSSDIVYYEAFTTAEQLRKLRTEAFKPEA    150
                     ||||||.||||.||||.::|||||||:|.|:|:.|::||:|:..||.|.|
BPUM_0299___y     75 GWELRKALRLFNKSNPSIMEWLSSDIIYAESFSLAKKLRELKDRAFYPAA    124

BSNT_00567___    151 SVYHYINMARRNVKDYLQGQEVKIKKYFYVLRPILACQWIEKHGTIPPMD    200
                     .:|||:||||||...:|:|::|:||||||||||:|||:|||::.|:||||
BPUM_0299___y    125 LMYHYLNMARRNESRHLRGEQVRIKKYFYVLRPLLACEWIERYRTVPPMD    174

BSNT_00567___    201 FTVLMNELVREPELKAEMETLLERKRRGEELDLEARIDVIHQFIETEIER    250
                     |..|:.:||.|..|..|:..||:||..|||:|:|.|:..:|.||:.|:.|
BPUM_0299___y    175 FHELLKDLVEEGPLLTEIHELLKRKMDGEEMDVENRLAHVHPFIDKELVR    224

BSNT_00567___    251 IMEAAKELKAEKKDMTSELNRLLLNTVEEVWKDGGS    286
                     ..|..|.....|.::..|||.||.:|::|||.    
BPUM_0299___y    225 FDELVKSYNQPKDNLMQELNELLQSTLDEVWT----    256


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