Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00531 and BPUM_0275
See
DNA alignment /
Visit
BSNT_00531 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence pep-align/BSNT_00531___amhX.1.24716.seq
# -bsequence pep-align/BPUM_0275___amhX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00531___amhX-BPUM_0275___amhX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00531___amhX-BPUM_0275___amhX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00531___amhX
# 2: BPUM_0275___amhX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 383
# Identity: 264/383 (68.9%)
# Similarity: 313/383 (81.7%)
# Gaps: 8/383 ( 2.1%)
# Score: 1415.0
#
#
#=======================================
BSNT_00531___ 1 MQKLSEDMKQTIMDIFEHLHANPEVSWKEYETTSFLKQKLEDLGCRTRTF 50
|..|:.||:||:.||||||||:||:||:|..||::|:..|:.:||:||||
BPUM_0275___a 1 MTTLTNDMQQTVKDIFEHLHAHPEISWEETNTTAYLEDLLKKIGCQTRTF 50
BSNT_00531___ 51 SDCTGVVGEIGSGSPVVAVRADIDALWQEVNGTFRANHSCGHDSHMTMAL 100
.|||||:||||.||||||||||||||||||:|.|:||||||||:||||||
BPUM_0275___a 51 DDCTGVIGEIGEGSPVVAVRADIDALWQEVDGEFQANHSCGHDAHMTMAL 100
BSNT_00531___ 101 GTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVH 150
||.|.||:: |||.||||||||||||||||||||||||||.|:|||||||
BPUM_0275___a 101 GTFMALKEK-ELPNGTIRFIFQPAEEKGGGALKMIEEGVLADVDYLYGVH 149
BSNT_00531___ 151 VRPIQETQNGRCAPSILHGSSQHIEGTIIGEETHGARPHLGKNSIEIAAF 200
|||||||.||||||:||||||.|..|||||||.||||||||.|.||:|:.
BPUM_0275___a 150 VRPIQETLNGRCAPAILHGSSNHYIGTIIGEEAHGARPHLGINVIEVAST 199
BSNT_00531___ 201 LVHKLGLIHIDPQIPHTVKMTKLQAGGESSNIIPGKASFSLDLRAQTNEA 250
||.:|..||:||::.|:||||.|.|||.|||||||||||:||:||||||.
BPUM_0275___a 200 LVQRLAHIHVDPRVAHSVKMTNLHAGGGSSNIIPGKASFTLDVRAQTNEV 249
BSNT_00531___ 251 MEALIAETERACEAAAAAFGAKIDLQKEHSLPAATQNKEAEAIMAEAITD 300
|:.|..|.|||..:.|.||||.|.|..:|.|||||.|:||..:|::||..
BPUM_0275___a 250 MDELEKEIERAVHSVADAFGASISLSTDHRLPAATLNEEAVQMMSQAIEK 299
BSNT_00531___ 301 IIGAERLDDPLVTTGGEDFHFYAVKVPNLKTTMLGLGCGLQPGLHHPHMT 350
::|.|:||.||||||||||||||.|:|::|:|||||||.|:||||||:||
BPUM_0275___a 300 VLGKEQLDPPLVTTGGEDFHFYAAKLPHIKSTMLGLGCDLEPGLHHPYMT 349
BSNT_00531___ 351 FDRNAMFNGIHILANAVLKTFQKADSPAAAYVK 383
|||:|:|.||.||..||.:|.|:..|
BPUM_0275___a 350 FDRSAIFTGIEILTEAVYQTLQQHSS------- 375
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.