Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02611 and BPUM_0221

See DNA alignment / Visit BSNT_02611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_02611___ylqB.1.24716.seq
#    -bsequence pep-align/BPUM_0221___ylqB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02611___ylqB-BPUM_0221___ylqB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02611___ylqB-BPUM_0221___ylqB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02611___ylqB
# 2: BPUM_0221___ylqB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:      59/165 (35.8%)
# Similarity:    85/165 (51.5%)
# Gaps:           9/165 ( 5.5%)
# Score: 243.0
# 
#
#=======================================

BSNT_02611___      1 MKKIGLLFMLCLAALFTIGFPAQQADAAEAPYKASITNI-STDGGVYGKI     49
                     ||||...|.|.|..:|.....|::..|  .|....:|:: :.|.|:   :
BPUM_0221___y      1 MKKIMFAFFLSLLLVFPTFAHAEETGA--VPASVQVTSVTAADSGL---V     45

BSNT_02611___     50 NYGQGQYWRV--KYNITVSGKLLDQNGQPVPNAPVRFEADTKVGNTTQTA     97
                     |||.|..:||  .|..|..|.|.|.:|..:||.||:...:..:.:..|||
BPUM_0221___y     46 NYGYGSKYRVGSYYPATFKGTLKDASGNLMPNQPVQLYFEAAIKSYAQTA     95

BSNT_02611___     98 SGTTDANGTFEVPMYLGPAAGYYTYYTS-VSVHYYDIIPFRVFSGESRLV    146
                     :||||.||.|.:...:...|||.:|..: .|.||||::|....|.:.:|.
BPUM_0221___y     96 TGTTDGNGQFSLTFQVPAGAGYQSYNNAGWSTHYYDVVPVTFTSKDIKLS    145

BSNT_02611___    147 STDNSLYHFAYQVRR    161
                     |...|:||.||..|.
BPUM_0221___y    146 SNVTSVYHLAYTSRY    160


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