Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00236 and BPUM_0118

See DNA alignment / Visit BSNT_00236 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00236___rplR.1.24716.seq
#    -bsequence pep-align/BPUM_0118___rplR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00236___rplR-BPUM_0118___rplR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00236___rplR-BPUM_0118___rplR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00236___rplR
# 2: BPUM_0118___rplR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     106/120 (88.3%)
# Similarity:   114/120 (95.0%)
# Gaps:           0/120 ( 0.0%)
# Score: 534.0
# 
#
#=======================================

BSNT_00236___      1 MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNG     50
                     |||||||||.||||||||||||||||||||||||||||:||||:||||||
BPUM_0118___r      1 MITKTSKNATRLKRHARVRAKLSGTAERPRLNVFRSNKNIYAQVIDDVNG     50

BSNT_00236___     51 VTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGY    100
                     |||.|||||||||.:|::.|.:|||||||||||||.|||||:||||||||
BPUM_0118___r     51 VTLVSASTLDKDLKIENSSDAAAATKVGELVAKRAVEKGISNVVFDRGGY    100

BSNT_00236___    101 LYHGRVKALADAAREAGLKF    120
                     ||||||||||:|||||||||
BPUM_0118___r    101 LYHGRVKALAEAAREAGLKF    120


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