Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02210 and BL03734

See DNA alignment / Visit BSNT_02210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_02210___ykmA.1.5803.seq
#    -bsequence pep-align/BL03734___ohrR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02210___ykmA-BL03734___ohrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02210___ykmA-BL03734___ohrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02210___ykmA
# 2: BL03734___ohrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:      95/150 (63.3%)
# Similarity:   116/150 (77.3%)
# Gaps:           3/150 ( 2.0%)
# Score: 481.0
# 
#
#=======================================

BSNT_02210___      1 MENKFDHMKLENQLCFLLYASSREMIKQYKPLLDKLNITYPQYLALLLLW     50
                     |.|:|:||:|:.|||||||||||||.|.||||||:|||||||||||||||
BL03734___ohr      1 MANEFEHMRLDRQLCFLLYASSREMTKLYKPLLDELNITYPQYLALLLLW     50

BSNT_02210___     51 EHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISL    100
                     ||..|:||.||:.|||||||||||||||||.||:||:||.||||||::.|
BL03734___ohr     51 EHGELSVKTMGKLLYLDSGTLTPMLKRMEQHGLLTRERSPEDERSVIVRL    100

BSNT_02210___    101 TEDGALLKDKAVDIPETILGLSKQSGEDLKQLKSALYTLLETLHQKN---    147
                     |..|..|::||..||:.::..:..|..:||.||..|.:||.:|.:|.   
BL03734___ohr    101 TAGGQALQEKASSIPQHMIAQTDLSAGELKNLKQTLESLLASLTKKTDVL    150


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