Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05344 and BL03594

See DNA alignment / Visit BSNT_05344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:27
# Commandline: needle
#    -asequence pep-align/BSNT_05344___yvkN.1.5803.seq
#    -bsequence pep-align/BL03594___yvkN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05344___yvkN-BL03594___yvkN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05344___yvkN-BL03594___yvkN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05344___yvkN
# 2: BL03594___yvkN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      29/76 (38.2%)
# Similarity:    48/76 (63.2%)
# Gaps:           0/76 ( 0.0%)
# Score: 146.0
# 
#
#=======================================

BSNT_05344___      1 MEKDPSDYTVTQESVLKLIHEQKRMNREMIAELEQIHGPFPISHDIQYIK     50
                     |::....|..:...:|.||.||||||:|::..||.|:...|:|.:|:|:|
BL03594___yvk      1 MKQKSEVYASSASQLLSLIQEQKRMNQEIVNRLESINSAPPLSSEIRYLK     50

BSNT_05344___     51 VLLDSSNTHIVQDLMSVSKQLYKKTL     76
                     |||:||:|||:..:...:|.:.:...
BL03594___yvk     51 VLLNSSSTHILNSMSEATKHISRTER     76


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.