Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02242 and BL03526

See DNA alignment / Visit BSNT_02242 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02242___ykoM.1.5803.seq
#    -bsequence pep-align/BL03526___ykoM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02242___ykoM-BL03526___ykoM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02242___ykoM-BL03526___ykoM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: BL03526___ykoM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     135/154 (87.7%)
# Similarity:   147/154 (95.5%)
# Gaps:           1/154 ( 0.6%)
# Score: 693.0
# 
#
#=======================================

BSNT_02242___      1 MMRLSFNEEEVERAMNLYRVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     50
                      ||||||||||.|||:||:|||||||||||||||||||||||||||||||
BL03526___yko      1 -MRLSFNEEEVHRAMSLYKVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     49

BSNT_02242___     51 LLYTRGPQKLQQIGSRLLLVSGNVTYVIDKLERNGFLVREQDPKDKRSVY    100
                     ||||||.|||||||||||||||||||||||||:|||:.||||||||||||
BL03526___yko     50 LLYTRGAQKLQQIGSRLLLVSGNVTYVIDKLEKNGFIKREQDPKDKRSVY     99

BSNT_02242___    101 AHLTDKGNEYLDKIYPIHALRIARAFSGLSPDEQDQLIVLLKKAGIHSQH    150
                     |:||:||..|||:|||||:||||||||||:.:||:||:||||||||||||
BL03526___yko    100 ANLTEKGKAYLDEIYPIHSLRIARAFSGLTKEEQEQLMVLLKKAGIHSQH    149

BSNT_02242___    151 LLFR    154
                     ||||
BL03526___yko    150 LLFR    153


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