Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02242 and BL03526
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02242___ykoM.1.5803.seq
# -bsequence dna-align/BL03526___ykoM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02242___ykoM-BL03526___ykoM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02242___ykoM-BL03526___ykoM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: BL03526___ykoM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity: 363/470 (77.2%)
# Similarity: 363/470 (77.2%)
# Gaps: 13/470 ( 2.8%)
# Score: 1386.5
#
#
#=======================================
BSNT_02242___ 1 ATGATGAGATTATCGTTTAACGAAGAAGAAGTTGAGCGTGCGATGAATTT 50
||||||.|.||||||||.||.|||||||||.|.|||||.|||....|
BL03526___yko 1 ---ATGAGACTTTCGTTTAATGAGGAAGAAGTTCACCGTGCTATGTCGCT 47
BSNT_02242___ 51 GTACAGAGTTTTTGCAAGGGCTTTCAAAAGTGTGTCCGAACATAGTATCC 100
|||||..||||||||.||||||||.|||||.||.||.|||||||||||.|
BL03526___yko 48 GTACAAGGTTTTTGCCAGGGCTTTTAAAAGCGTTTCAGAACATAGTATTC 97
BSNT_02242___ 101 GTGATAGCAAAGAGCACGGTTTTAATCCCACTGAATTTGCTGTACTGGAG 150
|.||.|||||.||.|||||.||||||||.||.||||||||||||.|||||
BL03526___yko 98 GGGACAGCAAGGAACACGGCTTTAATCCTACAGAATTTGCTGTATTGGAG 147
BSNT_02242___ 151 CTCCTGTACACAAGAGGCCCGCAAAAATTACAGCAAATTGGGTCGAGACT 200
||..||||.||.||.||..|.|||||..|.||||||||.||.|||||.||
BL03526___yko 148 CTTTTGTATACGAGGGGAGCCCAAAAGCTGCAGCAAATCGGCTCGAGGCT 197
BSNT_02242___ 201 TCTGCTTGTAAGCGGAAACGTCACATATGTTATTGACAAACTAGAAAGAA 250
.||.|||||||||||.|||||.||.|||||.||.||||||||.||||.||
BL03526___yko 198 GCTCCTTGTAAGCGGGAACGTAACCTATGTGATCGACAAACTGGAAAAAA 247
BSNT_02242___ 251 ACGGGTTTTTAGTAA--GGGAGCAGGACCCGAAAGATAAACGCTCTGTTT 298
|||| |||.|..|| |.|||||||||||||||||||||||.|||||.|
BL03526___yko 248 ACGG--TTTCATCAAACGAGAGCAGGACCCGAAAGATAAACGGTCTGTCT 295
BSNT_02242___ 299 ACGCACATTTAACTGACAAGGGAAATGAGTATTTGGATAAAATTTATCCG 348
|.||..||||.||.||.||||||||.|..|||.|.|||.|.|||||||||
BL03526___yko 296 ATGCGAATTTGACGGAGAAGGGAAAGGCATATCTCGATGAGATTTATCCG 345
BSNT_02242___ 349 ATTCATGCACTGCGTATTGCGAGAGCGTTTTCAGGTCTTTCGCC---TGA 395
||.||..|.|||.|.||||||||.||.|||||||| ||| |.| .||
BL03526___yko 346 ATCCACTCCCTGAGAATTGCGAGGGCTTTTTCAGG-CTT--GACAAAGGA 392
BSNT_02242___ 396 TGAACAGGACCAGCTGATCGTCCTGCTCAAGAAAGCAGGCATACACAGCC 445
.||||||||.||||||||.|||||.||.||.|||||.||.||.|||||||
BL03526___yko 393 GGAACAGGAGCAGCTGATGGTCCTTCTGAAAAAAGCCGGAATCCACAGCC 442
BSNT_02242___ 446 AGCATTTGCTGTTTCGTTAA 465
||||..|..|||||||.|.|
BL03526___yko 443 AGCACCTATTGTTTCGCTGA 462
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