Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05296 and BL03415
See
DNA alignment /
Visit
BSNT_05296 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence pep-align/BSNT_05296___trxB.1.5803.seq
# -bsequence pep-align/BL03415___trxB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05296___trxB-BL03415___trxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05296___trxB-BL03415___trxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05296___trxB
# 2: BL03415___trxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity: 285/316 (90.2%)
# Similarity: 302/316 (95.6%)
# Gaps: 7/316 ( 2.2%)
# Score: 1484.0
#
#
#=======================================
BSNT_05296___ 1 MSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDV 50
|||||:||||||||||||||||||||||||||||:|||:|||||||||||
BL03415___trx 1 MSEEKMYDVIIIGAGPAGMTAAVYTSRANLSTLMVERGVPGGQMANTEDV 50
BSNT_05296___ 51 ENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVIDGKEYKVVKAGS 100
|||||||||||||||||||||||||||||||||||||:|..:||:|||||
BL03415___trx 51 ENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVVDEGDYKIVKAGS 100
BSNT_05296___ 101 KEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVV 150
||:|||||||.|||||||:|||||||||||||||||||||||||.|||||
BL03415___trx 101 KEFKARAVIITAGAEYKKLGVPGEKELGGRGVSYCAVCDGAFFKNKELVV 150
BSNT_05296___ 151 VGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLW 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03415___trx 151 VGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLW 200
BSNT_05296___ 201 NKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFEN 250
|||||||||::||||.|||||||||||.||:||||||||||||||:||:|
BL03415___trx 201 NKTVKEIHEQDGKVGKVTLVDTVTGEEEEFRTDGVFIYIGMLPLSEPFKN 250
BSNT_05296___ 251 LGITNEEGYIETNERMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQS 300
||||||||||.|||:|||||||||||||||||:|||||||||||||||||
BL03415___trx 251 LGITNEEGYIVTNEQMETKVEGIFAAGDIREKTLRQIVTATGDGSIAAQS 300
BSNT_05296___ 301 VQHYVEELQ------- 309
||||:|||:
BL03415___trx 301 VQHYIEELKEKEKAVK 316
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.