Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05296 and BL03415
See
Amino acid alignment /
Visit
BSNT_05296 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence dna-align/BSNT_05296___trxB.1.5803.seq
# -bsequence dna-align/BL03415___trxB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05296___trxB-BL03415___trxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05296___trxB-BL03415___trxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05296___trxB
# 2: BL03415___trxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity: 749/954 (78.5%)
# Similarity: 749/954 (78.5%)
# Gaps: 27/954 ( 2.8%)
# Score: 2993.5
#
#
#=======================================
BSNT_05296___ 1 GTGTCAGAAGAAAAAATTTATGACGTGATTATAATCGGCGCGGGCCCTGC 50
|||||||||||||||||.||||||||.|||||.||.||.||.||.|||||
BL03415___trx 1 GTGTCAGAAGAAAAAATGTATGACGTCATTATTATAGGAGCAGGTCCTGC 50
BSNT_05296___ 51 TGGGATGACGGCCGCTGTATACACATCAAGAGCGAATTTATCGACATTAA 100
.||.||||||||.||.||.||.||.|||||.|||||..|.|||||.||.|
BL03415___trx 51 GGGAATGACGGCAGCCGTTTATACGTCAAGGGCGAACCTGTCGACTTTGA 100
BSNT_05296___ 101 TGATTGAAAGAGGAATTCCTGGCGGACAAATGGCCAATACGGAAGATGTA 150
||.||||||||||..||||.||||||||.||||||||||||||.|||||.
BL03415___trx 101 TGGTTGAAAGAGGCGTTCCGGGCGGACAGATGGCCAATACGGAGGATGTT 150
BSNT_05296___ 151 GAAAACTATCCTGGATTCGAAAGTATCCTTGGGCCTGAGCTTTCTAACAA 200
|||||||||||.|||||.|||||.||.||.||.||.||||||||.||.||
BL03415___trx 151 GAAAACTATCCGGGATTTGAAAGCATTCTGGGACCCGAGCTTTCAAATAA 200
BSNT_05296___ 201 AATGTTTGAACACGCGAAAAAATTCGGCGCTGAATACGCTTATGGCGATA 250
||||||||||||.||||||||.|||||||||||.||.||.||.|||||||
BL03415___trx 201 AATGTTTGAACATGCGAAAAAGTTCGGCGCTGAGTATGCGTACGGCGATA 250
BSNT_05296___ 251 TTAAAGAGGTCAT---TGACGGCAAAGAGTACAAAGTAGTCAAAGCTGGT 297
|||||||.|||.| |||.|| |||.||.||..|.||||||||.||.
BL03415___trx 251 TTAAAGAAGTCGTCGATGAAGG---AGACTATAAGATCGTCAAAGCGGGA 297
BSNT_05296___ 298 TCAAAGGAATATAAAGCCCGTGCTGTCATCATTGCTGCAGGTGCGGAATA 347
|||||.||||.||||||.||.||.||||||||..|.|||||.||.|||||
BL03415___trx 298 TCAAAAGAATTTAAAGCGCGCGCGGTCATCATCACAGCAGGCGCCGAATA 347
BSNT_05296___ 348 TAAAAAAATCGGCGTGCCTGGCGAAAAAGAATTGGGCGGACGCGGTGTAT 397
|||.||..|||||||.||||||||||||||..|.|||||.|||||.||.|
BL03415___trx 348 TAAGAAGCTCGGCGTACCTGGCGAAAAAGAGCTTGGCGGCCGCGGCGTTT 397
BSNT_05296___ 398 CTTATTGTGCAGTATGTGACGGCGCTTTCTTTAAAGGCAAAGAACTTGTC 447
||||||||||.||.|||||||||||.|||||||||..||||||.||.|||
BL03415___trx 398 CTTATTGTGCGGTTTGTGACGGCGCCTTCTTTAAAAACAAAGAGCTGGTC 447
BSNT_05296___ 448 GTTGTTGGCGGCGGAGATTCCGCGGTTGAAGAAGGCGTATATCTGACTCG 497
|||||.||.||.|||||.|||||.||||||||||||||.||..|.||.||
BL03415___trx 448 GTTGTCGGAGGAGGAGACTCCGCTGTTGAAGAAGGCGTGTACTTAACCCG 497
BSNT_05296___ 498 TTTCGCTTCAAAAGTAACGATTGTTCACAGACGTGATAAACTCCGTGCTC 547
|||||||||.||||||||.||.||.||..|.||.|||||.||..|.||.|
BL03415___trx 498 TTTCGCTTCGAAAGTAACAATCGTCCATCGCCGCGATAAGCTGAGAGCGC 547
BSNT_05296___ 548 AAAGTATTCTTCAAGCGAGAGCATTTGATAATGAAAAAGTTGACTTCCTA 597
||||.||||||||.|||.|.||.|||||.||.||||||||.|||||.||.
BL03415___trx 548 AAAGCATTCTTCAGGCGCGCGCGTTTGACAACGAAAAAGTCGACTTTCTC 597
BSNT_05296___ 598 TGGAACAAAACCGTGAAGGAAATTCATGAGGAAAACGGCAAAGTCGGTAA 647
|||||.||.||.||.||||||||||||||..||.||||.||||||||.||
BL03415___trx 598 TGGAATAAGACGGTCAAGGAAATTCATGAACAAGACGGAAAAGTCGGCAA 647
BSNT_05296___ 648 CGTAACGCTTGTCGATACGGTAACCGGTGAAGAAAGTGAATTCAAAACAG 697
.||.||.||.|||||||||||.||.||.||||||...||.|||...||.|
BL03415___trx 648 AGTGACACTGGTCGATACGGTCACAGGCGAAGAAGAAGAGTTCCGGACTG 697
BSNT_05296___ 698 ACGGCGTATTCATTTACATCGGCATGCTTCCTCTGTCTAAACCGTTTGAA 747
|||||||.||.||.||||||||.|||||.||.||.||..|.||.||..||
BL03415___trx 698 ACGGCGTCTTTATCTACATCGGTATGCTCCCGCTTTCAGAGCCTTTCAAA 747
BSNT_05296___ 748 AATCTGGGCATTACGAATGAAGAAGGCTACATCGAAACAAACGAACGCAT 797
||.||.||||||||.||||||||.||||||||||..|||||.||||..||
BL03415___trx 748 AACCTCGGCATTACAAATGAAGAGGGCTACATCGTGACAAATGAACAGAT 797
BSNT_05296___ 798 GGAGACAAAGGTTGAAGGAATTTTCGCTGCCGGAGACATTCGCGAAAAAT 847
|||.|||||.||.|||||.|||||.|||||.||||||||||||||.|||.
BL03415___trx 798 GGAAACAAAAGTCGAAGGCATTTTTGCTGCGGGAGACATTCGCGAGAAAA 847
BSNT_05296___ 848 CACTGCGCCAAATCGTAACGGCTACAGGAGACGGAAGTATTGCGGCACAA 897
|.||.|||||||||||||||||.|||||.||||||||.|||||.|||||.
BL03415___trx 848 CCCTTCGCCAAATCGTAACGGCAACAGGGGACGGAAGCATTGCCGCACAG 897
BSNT_05296___ 898 AGCGTACAGCATTATGTCGAAGAGCTTCAA----------------TAA- 930
|||||.|||||.|||.||||||||||..|| |||
BL03415___trx 898 AGCGTTCAGCACTATATCGAAGAGCTGAAAGAGAAAGAAAAGGCTGTAAA 947
BSNT_05296___ 930 ---- 930
BL03415___trx 948 ATAA 951
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.