Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04459 and BL03288

See DNA alignment / Visit BSNT_04459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_04459___ytkD.1.5803.seq
#    -bsequence pep-align/BL03288___ytkD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04459___ytkD-BL03288___ytkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04459___ytkD-BL03288___ytkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04459___ytkD
# 2: BL03288___ytkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     116/158 (73.4%)
# Similarity:   137/158 (86.7%)
# Gaps:           0/158 ( 0.0%)
# Score: 621.0
# 
#
#=======================================

BSNT_04459___      1 MYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEF     50
                     ||||||:|:|||||||:.:|||..|||||||||:..:||||.|:|||.||
BL03288___ytk      1 MYEFKDFYRNTVQLSFEKEPFSKEPKHVWVICRYEDQWLLTNHKDRGREF     50

BSNT_04459___     51 PGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGKEKVIVKNIY    100
                     |||||||.|.|||||||||||||||.|:.|.|||||||||:|||||||||
BL03288___ytk     51 PGGKVEPSENAEEAALREVKEETGAVVRKLTYLGQYKVLGREKVIVKNIY    100

BSNT_04459___    101 FADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKK    150
                     ||||||:|||..|:||.||||...||:::::||.:|||||||||.|||:|
BL03288___ytk    101 FADIEKIEKQQTYYETNGPVLLKSLPKDIAKNKNYSFIMKDSVLTISLEK    150

BSNT_04459___    151 LKESGWIE    158
                     ||::|.|:
BL03288___ytk    151 LKKAGIIK    158


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