Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00993 and BL03148

See DNA alignment / Visit BSNT_00993 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00993___ydhI.1.5803.seq
#    -bsequence pep-align/BL03148___yxbD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00993___ydhI-BL03148___yxbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00993___ydhI-BL03148___yxbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00993___ydhI
# 2: BL03148___yxbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      91/159 (57.2%)
# Similarity:   120/159 (75.5%)
# Gaps:           0/159 ( 0.0%)
# Score: 489.0
# 
#
#=======================================

BSNT_00993___      1 MIIIPNNEIAKHMLTAFFAKHWGTPEMAISSGIFRCDELDGFAAVNESGE     50
                     |.::..:.::|..:||||..|||:|||..|.|.||||||:|||..:|..:
BL03148___yxb      1 MKLVSTHALSKADVTAFFHTHWGSPEMVNSHGTFRCDELEGFAVTDEKSD     50

BSNT_00993___     51 IIGCITYLIDGKDCEIISLDSMIQNKGIGTALLQQVEETAKHAHCQRIKL    100
                     |.|.|||.|.|.:||::||||:::|||||:.|||:||..:|...|:.|||
BL03148___yxb     51 IKGLITYFIAGNECEVVSLDSVVENKGIGSLLLQEVERVSKRKQCKSIKL    100

BSNT_00993___    101 ITTNDNVHAMAFYQKRGYQFAEVFPNAVEKARRLKPEIPEVAENGILIRD    150
                     ||||||:.|:.|||||||..||::.|||:|||::|||||.||:|||.|||
BL03148___yxb    101 ITTNDNMRALMFYQKRGYTLAELYVNAVDKARKVKPEIPFVADNGIPIRD    150

BSNT_00993___    151 EILFSKVID    159
                     |||..|.:.
BL03148___yxb    151 EILLVKDLA    159


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.