Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00993 and BL03148
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence dna-align/BSNT_00993___ydhI.1.5803.seq
# -bsequence dna-align/BL03148___yxbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00993___ydhI-BL03148___yxbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00993___ydhI-BL03148___yxbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00993___ydhI
# 2: BL03148___yxbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity: 336/513 (65.5%)
# Similarity: 336/513 (65.5%)
# Gaps: 66/513 (12.9%)
# Score: 1025.5
#
#
#=======================================
BSNT_00993___ 1 ATGA---TC--ATCATCCCAAACAATG--AGATAGCGAAACATATGTTGA 43
|||| || ||||.|.||..|..|| | |.|||| .|.||| |
BL03148___yxb 1 ATGAAACTCGTATCAACGCACGCCTTGTCA-AAAGCG-----GACGTT-A 43
BSNT_00993___ 44 CCGCTTTTTTTGCCAAGCATTGGGGTACACCCGAGATGGCGATTTCAAGC 93
||||.||||||...|..||||||||.|..||.||.||||..|.||||..|
BL03148___yxb 44 CCGCGTTTTTTCATACACATTGGGGAAGTCCGGAAATGGTCAATTCACAC 93
BSNT_00993___ 94 GGCATTTTTCGGTGTGATGAATTAGATGGATTTGCCGCAGTAA---ATGA 140
||.|..||.||.||.||||||||.||.||||| |||.|||| ||||
BL03148___yxb 94 GGAACATTCCGCTGCGATGAATTGGAAGGATT---CGCTGTAACAGATGA 140
BSNT_00993___ 141 AAGCGGCGAAATCATTGGCTGTATTACATACTTGATAGATGGGAAAGATT 190
||...||||.||.|..||||..|||||.|||||.||.|.|||.||.||.|
BL03148___yxb 141 AAAAAGCGACATTAAAGGCTTGATTACGTACTTCATCGCTGGAAACGAAT 190
BSNT_00993___ 191 GTGAAATTATTTCATTAGATAGTATGATTCAAAATAAAGGAATCGGCACA 240
|||||.|..|.||.||.||.|||.|..|..||||.|||||.||||||.||
BL03148___yxb 191 GTGAAGTCGTCTCTTTGGACAGTGTTGTCGAAAACAAAGGGATCGGCTCA 240
BSNT_00993___ 241 GC----TTTAC------TTCAGCAGGTTGAAGAGACGGCTAAACATGCAC 280
| ||||| |..|||..|||..|.| ||.||| ||
BL03148___yxb 241 -CTCCTTTTACAAGAAGTGGAGCGTGTTTCAAA----GCGAAA-----AC 280
BSNT_00993___ 281 ATTGTCAA-CGAATAAAGCTTATCACAACGAATGATAATGTACATGCGAT 329
|.|||.|| |||.|||| ||.|||||.|||||.|||||| |||||
BL03148___yxb 281 AGTGTAAATCGATTAAA-CTGATCACGACGAACGATAAT----ATGCG-- 323
BSNT_00993___ 330 GGC------GTTTTATCAAAAGAGAGGCTATCAATTCGCCGAAGTGTTTC 373
||| |||||||||||||||.||||||...||.|||||..|||.|.
BL03148___yxb 324 GGCGCTTATGTTTTATCAAAAGAGGGGCTATACTTTGGCCGAGTTGTATG 373
BSNT_00993___ 374 CGAACGCAGTTGAAAAAGCGCGCCGACTCAAGCCGGAGATTCCCGAGGTG 423
..|||||||||||.|||||..|...|.|.||||||||.||||||...||.
BL03148___yxb 374 TAAACGCAGTTGACAAAGCAAGAAAAGTAAAGCCGGAAATTCCCTTTGTC 423
BSNT_00993___ 424 GCTGAAAACGGCATTTTGATTCGGGATGAAATTCTATTTTCGAAGGTAAT 473
|||||.|||||||||..||||||||||||.|||||||| |||.|.
BL03148___yxb 424 GCTGATAACGGCATTCCGATTCGGGATGAGATTCTATT------GGTGAA 467
BSNT_00993___ 474 TGATTAA------ 480
.||||.|
BL03148___yxb 468 AGATTTAGCATAG 480
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