Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02493 and BL03001
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_02493___ylbJ.1.5803.seq
# -bsequence pep-align/BL03001___ylbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02493___ylbJ-BL03001___ylbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02493___ylbJ-BL03001___ylbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02493___ylbJ
# 2: BL03001___ylbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 294/410 (71.7%)
# Similarity: 342/410 (83.4%)
# Gaps: 6/410 ( 1.5%)
# Score: 1489.5
#
#
#=======================================
BSNT_02493___ 1 MNLSKINTLLIASFFLFLTATVISHPQASFEASKTGLSMWWEVVFPSLLP 50
|::||:.||:||...|..||.||:|||.||:|||:||:||||||||||||
BL03001___ylb 1 MDMSKVKTLMIAVLLLSFTAAVITHPQESFDASKSGLAMWWEVVFPSLLP 50
BSNT_02493___ 51 FFILSELLIGFGIVRFVGVLLEPFMRPIFRVPGVGGFVLAMGMASGNPAG 100
||||||||||||:|||||:||||||||:||||||||||||||||||||||
BL03001___ylb 51 FFILSELLIGFGVVRFVGLLLEPFMRPVFRVPGVGGFVLAMGMASGNPAG 100
BSNT_02493___ 101 AKLTARLRQENQISRVEAERLASFTNSSNPLFIFGAVAVGFFQNASLGIL 150
||||:|||||.|||||||||||||||||||||||||||||||.|.|||::
BL03001___ylb 101 AKLTSRLRQERQISRVEAERLASFTNSSNPLFIFGAVAVGFFHNPSLGVV 150
BSNT_02493___ 151 LASAHYLGNLAVGLTMRSYGRKEEQQLRRKKTIPFPSVKDALHALHTARL 200
||:||||||.|||||||:||||||.:...:|.:|.||:|:||.|||.|||
BL03001___ylb 151 LAAAHYLGNFAVGLTMRTYGRKEENRTAVRKKLPVPSIKEALKALHQARL 200
BSNT_02493___ 201 AEKRPLGKILGDAVTSSVQTLLMVGGFIILFSVFNRLLSVVQLTDVLSVF 250
.|||||||:|.|||.||||||||||||||||||||.:|||:.:||:||..
BL03001___ylb 201 EEKRPLGKLLSDAVISSVQTLLMVGGFIILFSVFNNILSVMHITDILSHA 250
BSNT_02493___ 251 TKGALTLFQLPTQLDIPLLSGMFEITLGSKLVSETDVSLLQKAIIVSFIL 300
|:..||..|||...|.|||||:|||||||||||.||.:|||:|:||||||
BL03001___ylb 251 TRMILTALQLPGDFDKPLLSGLFEITLGSKLVSATDAALLQQAVIVSFIL 300
BSNT_02493___ 301 GFSGFSVQAQVAGILSETDIRFKPFFIARLLQGVYAAVFVMLLWKPLYTA 350
|||||.|||||||||:|||||||||||||:|||:|||:||::|||||||:
BL03001___ylb 301 GFSGFCVQAQVAGILAETDIRFKPFFIARILQGIYAAIFVLILWKPLYTS 350
BSNT_02493___ 351 WHDPYQYVFKSLNSSDMPTAFINGWNLLVQIGPAVTLCALFTYIIIF--S 398
::.|.:.||..|.:......|:..||.|.:|||.:|:..|..|||:: |
BL03001___ylb 351 FYSPTEPVFSFLTAGKTEPFFLEMWNTLAEIGPLLTIGTLLIYIILYAKS 400
BSNT_02493___ 399 YRLTNGTKKG 408
|. ..||
BL03001___ylb 401 YA---PVKK- 406
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