Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03350 and BL02931

See DNA alignment / Visit BSNT_03350 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03350.1.5803.seq
#    -bsequence pep-align/BL02931___ypjC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03350-BL02931___ypjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03350-BL02931___ypjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03350
# 2: BL02931___ypjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     185/290 (63.8%)
# Similarity:   215/290 (74.1%)
# Gaps:          58/290 (20.0%)
# Score: 995.0
# 
#
#=======================================

BSNT_03350         1 MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFH     50
                                                                       
BL02931___ypj      0 --------------------------------------------------      0

BSNT_03350        51 ISPSISNLVLNIPIFFIGWRLLGRTMFVYTLVGTVALSLFLSIFQRYEIH    100
                             :||||:|||||:|||||:|.||::|||:||:||.||||::||
BL02931___ypj      1 --------MLNIPVFFIGWKLLGRTVFSYTILGTVSLSVFLWIFQRFQIH     42

BSNT_03350       101 MPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPM    150
                     ||||:||||||||||||||.||||||::||||||||||.||:||||.:||
BL02931___ypj     43 MPLQNDLALAALFAGVFIGTGLGIIFRYGGTTGGVDIIVRLINKYFQVPM     92

BSNT_03350       151 GRTMFAFDACVIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAK    200
                     |:.||.||||||.|||:.|||||||||||||||||:::|||:||||||||
BL02931___ypj     93 GKAMFVFDACVITLSLIFYLSYKEAMYTLVAVFVASKVIDFMQEGGYAAK    142

BSNT_03350       201 GATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDVLYCVVPKNEL    250
                     ||||||.|||.||:||:||||||||:|||||||||.:.|:|||||||||:
BL02931___ypj    143 GATIISEKNDQIQRKIIEEMERGVTVLKGQGSYTKTERDILYCVVPKNEV    192

BSNT_03350       251 VMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR    290
                     ..||:||.|:|||||||||||||||||||||||||||:.|
BL02931___ypj    193 FQLKNVITSVDPHAFVAVSDVHDVLGEGFTLDENKNPITR    232


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