Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03350 and BL02931
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03350.1.5803.seq
# -bsequence dna-align/BL02931___ypjC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03350-BL02931___ypjC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03350-BL02931___ypjC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03350
# 2: BL02931___ypjC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 896
# Identity: 524/896 (58.5%)
# Similarity: 524/896 (58.5%)
# Gaps: 220/896 (24.6%)
# Score: 1808.5
#
#
#=======================================
BSNT_03350 1 ATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGC 50
BL02931___ypj 0 -------------------------------------------------- 0
BSNT_03350 51 GGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGG 100
BL02931___ypj 0 -------------------------------------------------- 0
BSNT_03350 101 CTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCAC 150
BL02931___ypj 0 -------------------------------------------------- 0
BSNT_03350 151 ATCAGCCCCTCTATCTCGAACCTGGTATTGAACATCCCGATTTTTTTTAT 200
||..|||||||||||.|.||.||.||
BL02931___ypj 1 ------------------------GTGCTGAACATCCCGGTCTTCTTCAT 26
BSNT_03350 201 TGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCA 250
.||||||....|.||||||||.||..|.||....||.|||.||.||||||
BL02931___ypj 27 CGGCTGGAAACTCCTCGGCAGAACGGTCTTCTCATACACCATTCTCGGCA 76
BSNT_03350 251 CTGT-AGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCA 299
|.|| |||| ||||..||||..|..|.||.||||||||.|...|.||.||
BL02931___ypj 77 CAGTCAGCC-TGTCGGTGTTTTTATGGATTTTTCAGCGCTTCCAGATTCA 125
BSNT_03350 300 TATGCCCCTTCAGCACGA-CTTAGCGCTCGCCGCTTTATTTGCCGGCGTA 348
||||||.|||||..|||| ||| ||||||||.||..|.|||||.|||||.
BL02931___ypj 126 TATGCCGCTTCAAAACGATCTT-GCGCTCGCGGCACTTTTTGCAGGCGTG 174
BSNT_03350 349 TTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGG 398
||.|||||..|||||.||||.||||||||.|..|.||||||.||.||.||
BL02931___ypj 175 TTTATCGGCACCGGATTGGGCATTATTTTCAGATACGGCGGAACAACGGG 224
BSNT_03350 399 CGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATCCCGA 448
|||.||||||||.||||..||..|..|.||.||.||||||....|.||||
BL02931___ypj 225 CGGCGTTGATATTATCGTGCGGCTGATCAACAAATATTTTCAAGTGCCGA 274
BSNT_03350 449 TGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCAT--CATTTTGTCTT 496
||||||.|.|.|||||||..||.||.||||||||||| ||||.|..|||
BL02931___ypj 275 TGGGCAAAGCCATGTTTGTGTTTGACGCCTGCGTCATTACATTATCCCTT 324
BSNT_03350 497 TGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTA 546
.||..|||.||.||||||||.|||||.|||||.|||||.||.||.|||
BL02931___ypj 325 --ATTTTTTACCTTTCCTATAAGGAAGCAATGTACACGCTTGTTGCCGTA 372
BSNT_03350 547 TTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACGCTGC 596
|||||.||..|||...|.|||||.|||||.|||||||||||.||.||.||
BL02931___ypj 373 TTTGTCGCCTCAAAGGTCATCGACTTTATGCAGGAAGGCGGTTATGCCGC 422
BSNT_03350 597 TAAAGGCGCTACGATCATCTCCTCGAAA--AACGACCTGATTCAG---AA 641
.||||||||.||.|||||||| .|||| |||||||.||||||| ||
BL02931___ypj 423 AAAAGGCGCCACCATCATCTC--TGAAAAGAACGACCAGATTCAGCGCAA 470
BSNT_03350 642 AAAGATTC-TTGAAGAAATGGAACGTGGCGTCACCATTTTGAAAGGACAA 690
|| || ||||||||||||||.|.||||||||..||||.|||||.|||
BL02931___ypj 471 AA----TCATTGAAGAAATGGAAAGAGGCGTCACAGTTTTAAAAGGTCAA 516
BSNT_03350 691 GGTTCCTACACAAAAGA-------GGATATAGATGTACTTTAT--TGTGT 731
||.||.||.|| .|||| |||.|| ||||| ||.||
BL02931___ypj 517 GGGTCTTATAC-GAAGACGGAGCGGGACAT--------TTTATACTGCGT 557
BSNT_03350 732 GGTGCCGAAAAACGAATTGGTGAT---GCTGAAAAGCGTGATTAACTCCA 778
.||.||||||||.|| |||..| ||||||||..|||||||..||..
BL02931___ypj 558 CGTTCCGAAAAATGA---GGTTTTCCAGCTGAAAAATGTGATTACTTCGG 604
BSNT_03350 779 TTGATCCCCATGCCTTTGTAGCGGTAAGCGATGTTCACGATGTGCTCGGA 828
|.||.||.||.||.||||||||.||||||||.||.|||||.|||||.|||
BL02931___ypj 605 TCGACCCGCACGCTTTTGTAGCCGTAAGCGACGTACACGACGTGCTGGGA 654
BSNT_03350 829 GAAGGATTTACGCTTGATGAAAATAAAAATCCGCTTC-CGCGCTGA 873
||.||.||||||||||||||.||.|||||||| |.|| |.||||||
BL02931___ypj 655 GAGGGTTTTACGCTTGATGAGAACAAAAATCC-CATCACCCGCTGA 699
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