Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03352 and BL02930

See DNA alignment / Visit BSNT_03352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03352___ypjB.1.5803.seq
#    -bsequence pep-align/BL02930.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03352___ypjB-BL02930.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03352___ypjB-BL02930.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03352___ypjB
# 2: BL02930
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     159/266 (59.8%)
# Similarity:   217/266 (81.6%)
# Gaps:           2/266 ( 0.8%)
# Score: 853.5
# 
#
#=======================================

BSNT_03352___      1 MKRKLTICLLIALIFYNGNAKAAERGSLEELNDLSDTVFQMTRQAKYEEA     50
                     |.||:.:|:::||:|.....||.|..:|:||.:|||||||:|||::||||
BL02930            1 MIRKVILCMMLALVFPAAGLKAKESSALQELTELSDTVFQLTRQSQYEEA     50

BSNT_03352___     51 LQVLEYFEKTLKSAEKKQQDPMLTGSQIRQITLGYNDMVRSLKQADTSDT    100
                     :|:|:||||.||:|||...:.|:|||:|||::|.|:|.::||:..:.:..
BL02930           51 VQILQYFEKRLKAAEKDGTEDMMTGSEIRQVSLAYHDTLKSLESEEVAHQ    100

BSNT_03352___    101 QKLRAAAQFRMLMDAVENRSDPLWGSLEKPIMEAFTELKRDVQKNGSTSF    150
                     :|.:|||||||||||:|:..||||.||:||||::|:.||..:||..:.:|
BL02930          101 EKFKAAAQFRMLMDAIESDHDPLWSSLKKPIMDSFSALKAGIQKEDNLTF    150

BSNT_03352___    151 HEKWNEFISLYDLIYPSLTIDVSEDQLETVGKHIDVIEQEEFQQMTESTK    200
                     .||||.|:||||.||||||||||..||::|..||.|:|...|||||||:|
BL02930          151 REKWNHFLSLYDTIYPSLTIDVSPKQLKSVSNHIAVVENGGFQQMTESSK    200

BSNT_03352___    201 LERLSLLQHDLKNVFDRVEEDDADPSLLWVMITTGSIIITALTYVGYRKY    250
                     ||||:||:.||::|||:|||||||||||||::||||||::.|||||:|||
BL02930          201 LERLTLLEKDLEDVFDQVEEDDADPSLLWVILTTGSIILSTLTYVGFRKY    250

BSNT_03352___    251 KAEKNKLKKR--DYPK    264
                     |||:::.:||  |:||
BL02930          251 KAEEDRRRKREKDWPK    266


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