Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02553 and BL02271
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence pep-align/BSNT_02553___pyrR.1.5803.seq
# -bsequence pep-align/BL02271___pyrR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02553___pyrR-BL02271___pyrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02553___pyrR-BL02271___pyrR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02553___pyrR
# 2: BL02271___pyrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 163/183 (89.1%)
# Similarity: 170/183 (92.9%)
# Gaps: 3/183 ( 1.6%)
# Score: 816.0
#
#
#=======================================
BSNT_02553___ 1 --MNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAK 48
..:|||:|||||||||||||||||||||||||||||||||||||||||
BL02271___pyr 1 MQEQEKAVVLDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAK 50
BSNT_02553___ 49 RLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITD 98
||||||||||||.|||||:|||||||||||||||.||||||||||.||||
BL02271___pyr 51 RLAERIEQIEGNKVTVGELDITLYRDDLSKKTSNKEPLVKGADIPADITD 100
BSNT_02553___ 99 QKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRAD 148
||||||||||||||||||.|||||||||||||||||||||||||||||||
BL02271___pyr 101 QKVILVDDVLYTGRTVRAAMDALVDVGRPSSIQLAVLVDRGHRELPIRAD 150
BSNT_02553___ 149 YIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE 181
:|||||||||:|||||||:|||..||.|||:.
BL02271___pyr 151 FIGKNIPTSKTEKVMVQLEEVDGRDLAAIYKK- 182
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