Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02553 and BL02271

See Amino acid alignment / Visit BSNT_02553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence dna-align/BSNT_02553___pyrR.1.5803.seq
#    -bsequence dna-align/BL02271___pyrR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02553___pyrR-BL02271___pyrR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02553___pyrR-BL02271___pyrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02553___pyrR
# 2: BL02271___pyrR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 557
# Identity:     413/557 (74.1%)
# Similarity:   413/557 (74.1%)
# Gaps:          19/557 ( 3.4%)
# Score: 1540.5
# 
#
#=======================================

BSNT_02553___      1 TTGAAT----------CAAAAAGCTGTCATTCTCGACGAACAGGCAATCA     40
                         ||          .||||.|||||..|.||.|||||||||||.||||
BL02271___pyr      1 ----ATGCAAGAGCAGGAAAAGGCTGTTGTGCTTGACGAACAGGCGATCA     46

BSNT_02553___     41 GACGGGCGCTGACCAGGATTGCTCACGAAATGATCGAACGCAATAAAGGA     90
                     ||.||||||||||.||.||.||.|||||||||||.|||||.||.||||||
BL02271___pyr     47 GAAGGGCGCTGACAAGAATCGCCCACGAAATGATTGAACGAAACAAAGGA     96

BSNT_02553___     91 ATGAATAACTGCATTCTTGTCGGCATTAAGACAAGAGGGATTTACCTGGC    140
                     |||||.|||||.||.||||||||.||.||.||.|||||.||.||.|||||
BL02271___pyr     97 ATGAACAACTGTATCCTTGTCGGAATCAAAACGAGAGGCATCTATCTGGC    146

BSNT_02553___    141 AAAACGCCTTGCGGAACGCATTGAACAGATTGAGGGAAATCCTGTTACAG    190
                     .|||||.|||||.|||||.|||||.||.||.||.|||||....||.||.|
BL02271___pyr    147 CAAACGGCTTGCCGAACGGATTGAGCAAATCGAAGGAAACAAAGTCACCG    196

BSNT_02553___    191 TCGGTGAAATTGATATTACTCTTTACAGAGACGATCTTTCTAAAAAAACA    240
                     |.||.||..|.||.||.||.||||||.|.||.|||||.||.||||||||.
BL02271___pyr    197 TAGGAGAGCTGGACATCACCCTTTACCGGGATGATCTCTCCAAAAAAACG    246

BSNT_02553___    241 AGCAACGATGAACCGCTTGTAAAAGGTGCAGATATTCCGGTAGATATTAC    290
                     ..|||..|.||.||||||||.|||||.||.||.|||||||..||.||.||
BL02271___pyr    247 TCCAATAAAGAGCCGCTTGTCAAAGGAGCGGACATTCCGGCGGACATCAC    296

BSNT_02553___    291 AGATCAAAAAGTCATTCTCGTTGATGATGTTCTGTATACCGGAAGAACAG    340
                     .||||||||.||.||.|||||.|||||.||.||.||.||.|||.|.||.|
BL02271___pyr    297 CGATCAAAAGGTGATCCTCGTCGATGACGTGCTTTACACGGGACGGACGG    346

BSNT_02553___    341 TCAGAGCAGGAATGGATGCGCTTGTTGATGTAGGCAGACCTTCCTCCATT    390
                     |||||||.|..|||||||||||.||.|||||.||..|.|||||.|||||.
BL02271___pyr    347 TCAGAGCGGCCATGGATGCGCTCGTCGATGTCGGGCGGCCTTCATCCATC    396

BSNT_02553___    391 CAGCTTGCAGTGCTTGTGGACAGAGGACACCGGGAGCTGCCGATCCGAGC    440
                     ||||||||.||||||||.|||.|.||.|||.|.||||||||||||.||||
BL02271___pyr    397 CAGCTTGCGGTGCTTGTCGACCGCGGCCACAGAGAGCTGCCGATCAGAGC    446

BSNT_02553___    441 GGATTATATCGGGAAAAACATCCCGACATCAAAGTCTGAAAAGGTTATGG    490
                     .||.|.|||||||||||||||||||||.||.||..|.||||||||.||||
BL02271___pyr    447 CGACTTTATCGGGAAAAACATCCCGACGTCGAAAACCGAAAAGGTCATGG    496

BSNT_02553___    491 TTCAGCTTGATGAGGTAGACCAAAACGATCTCGTCGCCATTTATGAAAA-    539
                     ||||..|.||.||.||.|||..|..|||.||.|..||.||||||.|||| 
BL02271___pyr    497 TTCAATTGGAGGAAGTTGACGGACGCGACCTTGCGGCGATTTATAAAAAG    546

BSNT_02553___    540 CGAATAA    546
                     .||    
BL02271___pyr    547 TGA----    549


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