Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04865 and BL02178

See DNA alignment / Visit BSNT_04865 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04865___yusJ.1.5803.seq
#    -bsequence pep-align/BL02178___yusJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04865___yusJ-BL02178___yusJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04865___yusJ-BL02178___yusJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04865___yusJ
# 2: BL02178___yusJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     497/594 (83.7%)
# Similarity:   544/594 (91.6%)
# Gaps:           0/594 ( 0.0%)
# Score: 2549.0
# 
#
#=======================================

BSNT_04865___      1 MAKKTAGVQKGGGFLIEDVTYDQMYTPEDFTDEHKMIAKTTEDYIEQDVL     50
                     |.:....::|||.||||:||.|||:||||||||||||||||||||..|||
BL02178___yus      1 MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVL     50

BSNT_04865___     51 PHIDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITE    100
                     |:||:||.|.|:||||||||||||||||||||||||||||||||||||||
BL02178___yus     51 PYIDEIEEHNFDHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITE    100

BSNT_04865___    101 KFSRAGSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYAL    150
                     |||||||||||||||||||:|||||||:|||||||||.||:|||.|||||
BL02178___yus    101 KFSRAGSFSLSYGAHVGIGTLPIVFFGTEEQKKKYLPSLATGEKFAAYAL    150

BSNT_04865___    151 TEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVD    200
                     |||||||||||||||||||||||||:|.|||||||||||||:|:||||:|
BL02178___yus    151 TEPGSGSDALGAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKID    200

BSNT_04865___    201 GDKFSAFIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQAEVPTENLLGE    250
                     |:.||||||||::.|||||||||||||||||||||||||.:||.||||||
BL02178___yus    201 GEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQVQVPKENLLGE    250

BSNT_04865___    251 IGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRRQFKTPIAG    300
                     .||||||||||||||||||||||||||||||||||||||||:||||||:.
BL02178___yus    251 PGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISK    300

BSNT_04865___    301 FSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKS    350
                     |||..|||..|:.:|||||||||||||||||.|...:.|:.|||||:|||
BL02178___yus    301 FSLIGEKIANMSVKLYAMESSVYRTVGLFEDKMGTLSEEEQKDGRQVAKS    350

BSNT_04865___    351 IAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRI    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02178___yus    351 IAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRI    400

BSNT_04865___    401 NRIFEGTNEINRLIVPSTFLKKALKGELSLFEKAQSLQEELMMLMPEEPG    450
                     ||||||||||||||||.|::|||:||||.|||||::||||||||||||||
BL02178___yus    401 NRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKALQEELMMLMPEEPG    450

BSNT_04865___    451 SGVLEQEKYIVKQAKKIALFAAGLAAQKYGKAIDREQEILVNVADIVSNV    500
                     .||||||||:::.|||.||..|||||||||||:|:|||||||:|||||.:
BL02178___yus    451 DGVLEQEKYLLRNAKKTALMIAGLAAQKYGKALDQEQEILVNIADIVSQI    500

BSNT_04865___    501 YAMESAVLRTEKAIAAQGAEKAAQKVLYTEIFVQEAFNEIEAHAKESLIA    550
                     ||||:|:|||||||.|.|.:|.|||:|||:||.||||.|||:||||||||
BL02178___yus    501 YAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEIESHAKESLIA    550

BSNT_04865___    551 MEEGDSLRMMLSALRKLTRVTPKNVIQKKREAAAGIFEAEKYTV    594
                     ||.||||||||||||||||.||.|||:|||:||.|:||||||.|
BL02178___yus    551 MESGDSLRMMLSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV    594


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04865 and BL02178

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
