Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03056 and BL02004

See DNA alignment / Visit BSNT_03056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_03056___gltC.1.5803.seq
#    -bsequence pep-align/BL02004___gltC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03056___gltC-BL02004___gltC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03056___gltC-BL02004___gltC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03056___gltC
# 2: BL02004___gltC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     237/300 (79.0%)
# Similarity:   271/300 (90.3%)
# Gaps:           0/300 ( 0.0%)
# Score: 1240.0
# 
#
#=======================================

BSNT_03056___      1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFER     50
                     ||||||.|||||||||||||||.||||||||||||||||||||.|.||||
BL02004___glt      1 MELRQLHYFMEVAEREHVSEAAMHLHVAQSAISRQIANLEEELGVDLFER     50

BSNT_03056___     51 EGRNIKLTPIGKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTS    100
                     ||||:||||||::||.|:||||||||:|||||||||||:|||||||||||
BL02004___glt     51 EGRNVKLTPIGRQFLDHIKTAMKAIDFAKEQIDEYLDPNRGTVKIGFPTS    100

BSNT_03056___    101 LASQLLPTVISAFKEEYPHVEFLLRQGSYKFLIEAVRNRDIDLALLGPVP    150
                     ||.|.|||||||||||:|:|.|||||||||||||||:|||||||.|||||
BL02004___glt    101 LAGQFLPTVISAFKEEHPNVAFLLRQGSYKFLIEAVKNRDIDLAFLGPVP    150

BSNT_03056___    151 TNFSDITGKILFTEKIYALVPLNHPLAKQKTVHLIDLRNDQFVLFPEGFV    200
                     :|.::|.|.|||:|.:.||||:||||:.||::||.||||||:||||:|::
BL02004___glt    151 SNIAEIKGDILFSESLLALVPVNHPLSGQKSLHLGDLRNDQYVLFPDGYI    200

BSNT_03056___    201 LREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTLLPESTFAETT    250
                     ||:||:|.|||.|:.|.:|:||||||||||||||.|||||||||.|.||.
BL02004___glt    201 LRKMAVDACKQVGYTPKISSEGEDLDAIKGLVSADMGVTLLPESAFNETA    250

BSNT_03056___    251 PRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLEQYQ    300
                     ||||.||||::||||||||||.||||||:|||..||:||.:|||:|:|||
BL02004___glt    251 PRFTKKIPIDYPQVKRTVGIITPKNRELSPSAKVFYQFVKKFFSRLQQYQ    300


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