Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03056 and BL02004
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_03056___gltC.1.5803.seq
# -bsequence dna-align/BL02004___gltC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03056___gltC-BL02004___gltC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03056___gltC-BL02004___gltC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03056___gltC
# 2: BL02004___gltC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 636/933 (68.2%)
# Similarity: 636/933 (68.2%)
# Gaps: 60/933 ( 6.4%)
# Score: 2059.5
#
#
#=======================================
BSNT_03056___ 1 ATGGAGCTGCGCCAACTGCGTTATTTCATGGAGGTGGCTGAAAGAGAACA 50
|||||..|.||||||.|||.|||.||.|||||.||.||.||||||||.||
BL02004___glt 1 ATGGAATTACGCCAATTGCATTACTTTATGGAAGTTGCGGAAAGAGAGCA 50
BSNT_03056___ 51 CGTTTCAGAAGCCGC--TGATCATTTGCATGTGGCCCAATCAGCAATCAG 98
.||.||.|||||.|| || ||..|.|||||.||.||.||.||.|||||
BL02004___glt 51 TGTATCGGAAGCGGCCATG--CACCTTCATGTCGCTCAGTCGGCGATCAG 98
BSNT_03056___ 99 CAGACAAATTGCTAATCTTGAAGAAGA-----------ATTAAATGTGAC 137
|||.||.||.||.|||||.||.||||| ||
BL02004___glt 99 CAGGCAGATCGCCAATCTAGAGGAAGAGCTCGGCGTTGAT---------- 138
BSNT_03056___ 138 CTTATTTGAGCGTGAAGGGAGAAATATCAAACTCACGCCAATCGGAAAAG 187
||.||||||||.|||||..|.|||.|.||.||.||.||.||.||.|...
BL02004___glt 139 -TTGTTTGAGCGCGAAGGCCGGAATGTGAAGCTGACTCCGATTGGGAGGC 187
BSNT_03056___ 188 AATTTTT-GATTCATGTGAAAACGGCGATGAAAGCCATTGATTATGCGAA 236
|.||||| || .|||.|.|||||||||||||||||.||.||||.||||||
BL02004___glt 188 AGTTTTTAGA-CCATATTAAAACGGCGATGAAAGCGATCGATTTTGCGAA 236
BSNT_03056___ 237 AGAGCAAATTGATGAGTATCTTGACCCGCATCGCGGAACGGTAAAGATCG 286
.||.|||||.||.||||||.|.||||||.|||||||.||.||.||.||||
BL02004___glt 237 GGAACAAATCGACGAGTATTTGGACCCGAATCGCGGGACCGTTAAAATCG 286
BSNT_03056___ 287 GCTTTCCTACAAGCCTCGCCAGCCAGCTTTTGCCGACTGTCATTTCAGCG 336
|.||.||.||||||||.||..|||||.|..|.|||||.||||||||.||.
BL02004___glt 287 GTTTCCCGACAAGCCTTGCGGGCCAGTTCCTCCCGACCGTCATTTCCGCT 336
BSNT_03056___ 337 TTTAAAGAAGAATATCCGCACGTCGAATTTTTGCTGCGCCAAGGCTCCTA 386
||||||||.||..||||..|.||||..|||.|..|..|.||.||.||.||
BL02004___glt 337 TTTAAAGAGGAGCATCCTAATGTCGCTTTTCTTTTAAGACAGGGATCTTA 386
BSNT_03056___ 387 TAAGTTTCTGATTGAAGCTGTCAGAAACCGCGATATTGATCTGGCCTTAT 436
|||.|||.|.||.|||||.||.|.||||.|.|||||.|||.||||.||..
BL02004___glt 387 TAAATTTTTAATCGAAGCGGTGAAAAACAGGGATATCGATTTGGCTTTTC 436
BSNT_03056___ 437 TAGGACCGGTGCCGACGAATTTCTCTGACATAACGGGAAAAATATTATTT 486
|.||.||.||.|||.|.||..|..|.||.||.|..|||.|.||.||.|||
BL02004___glt 437 TCGGTCCCGTCCCGTCAAACATTGCCGAGATTAAAGGAGACATTTTGTTT 486
BSNT_03056___ 487 ACTGAAAAAATTTACGCGCTTGTTCCATTAAATCATCCGCTTGCTAA--A 534
.|.||.|...||...|||||.||.||..|.||||||||| ||| |.| .
BL02004___glt 487 TCGGAGAGCCTTCTGGCGCTCGTGCCGGTCAATCATCCG-TTG-TCAGGC 534
BSNT_03056___ 535 CAAAAAACGGTTCATTTAATCGATTTGCGCAACGACCAATTTGTATTGTT 584
||.||||...|||||.|...||||.|..|.||.||.||.|.|||..||||
BL02004___glt 535 CAGAAAAGTCTTCATCTCGGCGATCTCAGAAATGATCAGTATGTGCTGTT 584
BSNT_03056___ 585 CCCGGAAGGATTTGTA----CTTAGAGAGATGGCAATTGATACTTGCAAA 630
.||.||.|| ||| ||..||.|.|||||..||||..|.|||||.
BL02004___glt 585 TCCTGACGG----GTACATTCTCCGAAAAATGGCTGTTGACGCATGCAAG 630
BSNT_03056___ 631 CAAGCAGGCTTTGCTCCTCTCGTTTCCACGGAGGGTGAGGATTTGGATGC 680
||||..||.|.|.|.|||....|||||.|||||||.||.|||||||||||
BL02004___glt 631 CAAGTCGGATATACGCCTAAAATTTCCTCGGAGGGCGAAGATTTGGATGC 680
BSNT_03056___ 681 TATCAAAGGGTTAGTGTCCGCAGGGATGGGCGTTACCCTTCTGCCTGAAA 730
.|||||||||.|.||.||.||.|..|||||.||.||.|||.||||.||||
BL02004___glt 681 GATCAAAGGGCTTGTTTCTGCTGATATGGGGGTGACGCTTTTGCCGGAAA 730
BSNT_03056___ 731 GTACTTTTGCTGAAACAACACCTCGTTTTACTGTGAAAATTCCAATTGAG 780
|..|.|||..||||||..||||.||||||||...|||.|||||.|||||.
BL02004___glt 731 GCGCCTTTAATGAAACGGCACCCCGTTTTACAAAGAAGATTCCGATTGAT 780
BSNT_03056___ 781 TTCCCTCAAGTAAAACGGACTGTCGGAATCATTAAACCGAAAAATAGAGA 830
|..||.||.|||||.||.||.|||||.|||||.|..||.|||||.||.||
BL02004___glt 781 TATCCGCAGGTAAAGCGCACGGTCGGGATCATCACCCCTAAAAACAGGGA 830
BSNT_03056___ 831 GCTTGCGCCTTCTGCGAATGATTTTTATGAGTTTGTCA-----TTCAATT 875
||||.|.||||||||.||.|..||||||.||||.||.| || ||
BL02004___glt 831 GCTTTCCCCTTCTGCAAAAGTCTTTTATCAGTTCGTAAAGAAGTT---TT 877
BSNT_03056___ 876 TTTCTCTAAGTTGG-----AGCAGTATCAATAA 903
|||||| | ||||.|||||||||
BL02004___glt 878 TTTCTC-------GCCTTCAGCAATATCAATAA 903
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