Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00644 and BL01740
See
DNA alignment /
Visit
BSNT_00644 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence pep-align/BSNT_00644___yclB.1.5803.seq
# -bsequence pep-align/BL01740___yclB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00644___yclB-BL01740___yclB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00644___yclB-BL01740___yclB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00644___yclB
# 2: BL01740___yclB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 148/204 (72.5%)
# Similarity: 170/204 (83.3%)
# Gaps: 15/204 ( 7.4%)
# Score: 797.0
#
#
#=======================================
BSNT_00644___ 1 MKAEFKRKGGGKVKLVVGMTGATGAIFGVRLLQWLKAAGVETHLVVSPWA 50
:.::||:||||||:||||:|:|||....|||||:||||
BL01740___ycl 1 ------------MNIIVGITGATGAVFGVRMLEWLKKTDAETHLVISPWA 38
BSNT_00644___ 51 NVTIKHETGYTLQEVEQLATYTYSHKDQAAAISSGSFDTDGMIVAPCSMK 100
..||.||||||:::||:||::|||||||||.||||||.||||||||||||
BL01740___ycl 39 AATILHETGYTMKDVEKLASFTYSHKDQAARISSGSFQTDGMIVAPCSMK 88
BSNT_00644___ 101 SLASIRTGMADNLLTRAADVMLKERKKLVLLTRETPLNQIHLENMLALTK 150
:||.||||||||||||:|||||||||||||||||||||||||||||.|||
BL01740___ycl 89 TLAGIRTGMADNLLTRSADVMLKERKKLVLLTRETPLNQIHLENMLELTK 138
BSNT_00644___ 151 MGTIILPPMPAFYNQPSSLEEMVDHIVFRTLDQFGIRLPEAKRWNGIEKQ 200
||.:||||||||||.|.:|.||||||||||||||||.|.|||||.|::::
BL01740___ycl 139 MGAVILPPMPAFYNHPQNLTEMVDHIVFRTLDQFGIHLSEAKRWEGMKQE 188
BSNT_00644___ 201 KGGA 204
|
BL01740___ycl 189 K--- 189
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.