Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00644 and BL01740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00644___yclB.1.5803.seq
# -bsequence dna-align/BL01740___yclB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00644___yclB-BL01740___yclB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00644___yclB-BL01740___yclB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00644___yclB
# 2: BL01740___yclB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 631
# Identity: 422/631 (66.9%)
# Similarity: 422/631 (66.9%)
# Gaps: 77/631 (12.2%)
# Score: 1487.0
#
#
#=======================================
BSNT_00644___ 1 ATGAAAGCAGAATTCAAGCGTAAAGGAGGGGGCAAAGTGAAACTCGTTGT 50
.||||..||.|.||
BL01740___ycl 1 ------------------------------------ATGAACATCATCGT 14
BSNT_00644___ 51 CGGAATGACAGGGGCAACAGGGGCCATTTTTGGGGTCAGGCTGCTGCAGT 100
||||||.||.||.||.||.||.||..|.|||||.||..||.|||||.|||
BL01740___ycl 15 CGGAATCACGGGCGCGACCGGCGCGGTATTTGGCGTGCGGATGCTGGAGT 64
BSNT_00644___ 101 GGCTGAAG---GCCGCCGGAGTGGAAACCCATCTCGTTGTGTCTCCTTGG 147
|||||||| .|||.||.| ||.||.||.||.||..|.|||||.|||
BL01740___ycl 65 GGCTGAAGAAAACCGACGCA---GAGACACACCTTGTCATCTCTCCGTGG 111
BSNT_00644___ 148 GCAAACGTC-ACGATCAAACACGAAACAGGCTATACCTTACAAGAAGTAG 196
|| |.||.| ||||||...||||||||.||.|||||..|..||||.||.|
BL01740___ycl 112 GC-AGCGGCAACGATCCTGCACGAAACGGGATATACGATGAAAGACGTGG 160
BSNT_00644___ 197 AACAACTGGCCACATACACTTACTCACATAAGGATCAGGCGGCAGCCATT 246
||.|.||.||..|.|..||.||.||.||.||.||.||||||||...||||
BL01740___ycl 161 AAAAGCTCGCATCTTTTACGTATTCCCACAAAGACCAGGCGGCCCGCATT 210
BSNT_00644___ 247 TCAAGCGGGTCGTTTGATACCGATGGAATGATTGTTGCGCCGTGCAGCAT 296
||||||||.||.|||.|.||.||.|||||||||||.||.||||||||.||
BL01740___ycl 211 TCAAGCGGTTCCTTTCAAACGGACGGAATGATTGTCGCACCGTGCAGTAT 260
BSNT_00644___ 297 GAAATCTCTCGCAAGCATTCGCACCGGCATGGCGGATAATCTGCTGACAC 346
|||..|..|.||..||||.||||||||.|||||||||||.||..||||.|
BL01740___ycl 261 GAAGACGTTGGCGGGCATCCGCACCGGTATGGCGGATAACCTCTTGACCC 310
BSNT_00644___ 347 GTGCGGCGGATGTCATGCTCAAGGAGAGAAAAAAACTCGTCCTCTTAACG 396
||.|||||||.||||||||.|||||..|.|||||.|||||.||.|||||.
BL01740___ycl 311 GTTCGGCGGACGTCATGCTGAAGGAACGGAAAAAGCTCGTTCTGTTAACA 360
BSNT_00644___ 397 AGAGAGACGCCTTTGAACCAAATTCATCTCGAAAATATGCTAGCGCTTAC 446
||.||||||||..|||||||.||||||||.|||||.|||||.|.|||.||
BL01740___ycl 361 AGGGAGACGCCGCTGAACCAGATTCATCTTGAAAACATGCTTGAGCTGAC 410
BSNT_00644___ 447 GAAAATGGGTACAATCATTCTTCCTCCGATGCCGGCATTTTATAATCAGC 496
.||||||||..|..|.||.||.||.|||||||||||.|||||||||||.|
BL01740___ycl 411 AAAAATGGGGGCGGTGATCCTGCCGCCGATGCCGGCTTTTTATAATCATC 460
BSNT_00644___ 497 C---------GAGCAGCTTAGAGGAAATGGTTGACCATATTGTTTTTAGA 537
| ||.| ||||||||.||.|||||.||.|||.|.
BL01740___ycl 461 CCCAAAATCTGACC---------GAAATGGTCGATCATATCGTATTTCGG 501
BSNT_00644___ 538 ACGTTGGACCAATTCGGCATTCGGCTTCCTGAAGCGAAGCGCTGGAATGG 587
|||.||||||||||.|||||.|..||..|||||||||||||||||.|.||
BL01740___ycl 502 ACGCTGGACCAATTTGGCATCCATCTGTCTGAAGCGAAGCGCTGGGAAGG 551
BSNT_00644___ 588 GATTGAAAAACAAAAAGGAGGAGCTTGA--- 615
.|| .|||.|||||.| |
BL01740___ycl 552 TAT-------GAAACAGGAGAA-----ATAA 570
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