Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01778 and BL01092

See DNA alignment / Visit BSNT_01778 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01778___sipV.1.5803.seq
#    -bsequence pep-align/BL01092___sipV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01778___sipV-BL01092___sipV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01778___sipV-BL01092___sipV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01778___sipV
# 2: BL01092___sipV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     114/172 (66.3%)
# Similarity:   147/172 (85.5%)
# Gaps:           4/172 ( 2.3%)
# Score: 618.0
# 
#
#=======================================

BSNT_01778___      1 MKKRFWFLAGVVSV-VLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNK     49
                     |||||..:|||:.| |:.|||||||||:|||||||||||||||||||:|:
BL01092___sip      1 MKKRFLVIAGVLLVIVVGIQVKNAVFIEYKVEGVSMNPTFQEGNELLINR     50

BSNT_01778___     50 FSHRFKTIHRFDIVLFKGPDHKVLIKRVIGLPGETIKYKDDQLYVNGKQV     99
                     |:||||||.|||||||||||..:.|||||||||||::|:|||||:|.:::
BL01092___sip     51 FAHRFKTISRFDIVLFKGPDKDIFIKRVIGLPGETLRYEDDQLYINEEKI    100

BSNT_01778___    100 AEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFDS    149
                     .||:|..||:|:||..:||||:|::|||..|||:.:|||:|||||:||||
BL01092___sip    101 KEPYLDDLKAVTAGGDLTGDFTLQEVTGEEKVPENEYFVLGDNRIHSFDS    150

BSNT_01778___    150 RHFGPIREKNIVGVISDAE---    168
                     ||||.:.|::|||::::..   
BL01092___sip    151 RHFGFVSERDIVGIVTERIDKK    172


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