Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05921 and BL00941

See DNA alignment / Visit BSNT_05921 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05921___yxlC.1.5803.seq
#    -bsequence pep-align/BL00941___yxlC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05921___yxlC-BL00941___yxlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05921___yxlC-BL00941___yxlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05921___yxlC
# 2: BL00941___yxlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      40/110 (36.4%)
# Similarity:    63/110 (57.3%)
# Gaps:           7/110 ( 6.4%)
# Score: 171.5
# 
#
#=======================================

BSNT_05921___      1 MN----KEKLSDHLKSEWKKIDQTANPSIPNQKELLHQLSQMKAEYRKKL     46
                     ||    ||.:: |||.|.::||....|.:|...||..:|::.|.|.::.|
BL00941___yxl      1 MNERDEKETVT-HLKRELERIDDNFVPPVPQAFELNQRLARFKQERKRAL     49

BSNT_05921___     47 LQEIILFVFCALMVVSAAIYAFTQAPAVFIVLQVCVLAVLPILIAAEKKR     96
                     .:|::.|:..||:::||.:....|.|||||::|...|.:||.|...||:|
BL00941___yxl     50 KKELLCFIVMALVILSAYLTISVQVPAVFIMVQGAALILLPALALIEKRR     99

BSNT_05921___     97 HLGECEVKRR    106
                     |..:.|..  
BL00941___yxl    100 HTADEEAD--    107


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