Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05921 and BL00941
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05921___yxlC.1.5803.seq
# -bsequence dna-align/BL00941___yxlC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05921___yxlC-BL00941___yxlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05921___yxlC-BL00941___yxlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05921___yxlC
# 2: BL00941___yxlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity: 194/386 (50.3%)
# Similarity: 194/386 (50.3%)
# Gaps: 127/386 (32.9%)
# Score: 378.0
#
#
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BSNT_05921___ 1 -------------ATGAATAAAGAAAAGCTTTCTGATCATTTGAAGTCAG 37
||||| |||||||.|.||.| .||||||||....|
BL00941___yxl 1 GTGAATGAACGAGATGAA-AAAGAAACGGTTAC---ACATTTGAAACGCG 46
BSNT_05921___ 38 AA-TGGAAAAAAATTGATCAAA--------CAGCCAATCCCTC------- 71
|| |.| |||.|||||||.|.| |.|||..|.||||
BL00941___yxl 47 AACTCG-AAAGAATTGATGATAATTTTGTGCCGCCGGTTCCTCAAGCATT 95
BSNT_05921___ 72 TATACCGAATCAAAAAGAACTGC-TTCACCAGCTGT-----CACAAATGA 115
|..||.|||||| || ||.|.| ||.|| ||..|..|.
BL00941___yxl 96 TGAACTGAATCA---------GCGTTTAGC-GCGGTTTAAGCAAGAGCGC 135
BSNT_05921___ 116 AAGCTGAATACAG-----AAAAA--AACTTCTTCAAGAGATCATTTTATT 158
||||.| | ||||| ||.|.| |||.||
BL00941___yxl 136 AAGCGG------GCGCTTAAAAAGGAATTGC-------------TTTGTT 166
BSNT_05921___ 159 TGTAT--TC-TGCGCACTGATGGTTGTGAGTGCTGCAATC---------T 196
| ||| || || ||.|||.||.||.| ||| .
BL00941___yxl 167 T-TATCGTCATG-GCGCTGGTGATTTT----------ATCGGCCTACTTG 204
BSNT_05921___ 197 ATGCTTTCAC--TCAAGCTCCTGCTGTGTTTATTGTGCTTCAGGTTTGTG 244
|.|.|||| | |||||..||.|||||.|||||..||.|.||||.....|
BL00941___yxl 205 ACGATTTC-CGTTCAAGTACCGGCTGTTTTTATCATGGTGCAGGGAGCGG 253
BSNT_05921___ 245 TGCTTGCGGTGCTGC---CGATT---TTGATTGCGGCTGAGAAAAAA--A 286
.||||....|||||| ||.|| .|||| |||||||| .
BL00941___yxl 254 CGCTTATCTTGCTGCCAGCGCTTGCCCTGAT--------AGAAAAAAGGC 295
BSNT_05921___ 287 GGCATCTCGGCGAATGCGAGGTGAAACGCAGATGA- 321
||||| .||||..|| |||| |.||.|||.|
BL00941___yxl 296 GGCAT-ACGGCTGAT--GAGG----AGGCTGATTAA 324
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