Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00068 and BL00537

See DNA alignment / Visit BSNT_00068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00068___yabB.1.5803.seq
#    -bsequence pep-align/BL00537___yabB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00068___yabB-BL00537___yabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00068___yabB-BL00537___yabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: BL00537___yabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     209/247 (84.6%)
# Similarity:   228/247 (92.3%)
# Gaps:           0/247 ( 0.0%)
# Score: 1090.0
# 
#
#=======================================

BSNT_00068___      1 MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIV     50
                     |:.|.|||||||||||||||:||||||||||||||||||||||||||.|:
BL00537___yab      1 MIQLKDDERLDYLLAEDMKIVQSPTVFAFSLDAVLLSKFAYVPIQKGNII     50

BSNT_00068___     51 DLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQII    100
                     ||||||||||||||||:||.|.||||||||:|||:||||||.|..||.:|
BL00537___yab     51 DLCTGNGIVPLLLSTRTKAAITGVEIQERLYDMALRSVEYNNLQKQIHLI    100

BSNT_00068___    101 HDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCT    150
                     .|||||||:.||:|:.|||||||||||||::||||:||||.||||||:||
BL00537___yab    101 RDDLKNMPQVLGYNKADVVTCNPPYFKTPQKTEQNLNEHLAIARHEIYCT    150

BSNT_00068___    151 LEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPK    200
                     |||||.|||||||||||.||||||||||||||||||:|||||||||||||
BL00537___yab    151 LEDVIRVSSKLLKQGGKLALVHRPGRLLEIFELMKAFQIEPKRVQFVYPK    200

BSNT_00068___    201 QGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK    247
                     :.||||||||||||.|||||||||||||||||::||.|||.|||||:
BL00537___yab    201 KSKEANTILVEGIKDGRPDLKILPPLFVYDEQDQYTHEIRKILYGDE    247


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