Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00068 and BL00537
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_00068___yabB.1.5803.seq
# -bsequence dna-align/BL00537___yabB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00068___yabB-BL00537___yabB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00068___yabB-BL00537___yabB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: BL00537___yabB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 754
# Identity: 584/754 (77.5%)
# Similarity: 584/754 (77.5%)
# Gaps: 20/754 ( 2.7%)
# Score: 2224.5
#
#
#=======================================
BSNT_00068___ 1 ATGGTTTCATTACATGATGATGAAAGATTAGATTATTTGCTGGCAGAGGA 50
|||.||..||||.|.|||||||||.||.|.||||||||.|||||.||.||
BL00537___yab 1 ATGATTCAATTAAAAGATGATGAACGACTGGATTATTTACTGGCGGAAGA 50
BSNT_00068___ 51 CATGAAAATCATACAAAGCCCAACAGTGTTTGCTTTTTCGTTGGACGCTG 100
.|||||||||.|.||||||||.|||||.|||||.|||||.||.||.||||
BL00537___yab 51 TATGAAAATCGTGCAAAGCCCGACAGTTTTTGCATTTTCCTTAGATGCTG 100
BSNT_00068___ 101 TGCTTCTGTCCAAATTTGCGTACGTTCCGATTCAAAAAGGGAAAATTGTT 150
|.||.|||||.||||||||.|||||||||||.||||||||.||.||..||
BL00537___yab 101 TTCTGCTGTCGAAATTTGCTTACGTTCCGATACAAAAAGGAAACATCATT 150
BSNT_00068___ 151 GATTTATGCACCGGCAATGGTATTGTGCCGCTGCTGCTCAGTACAAGATC 200
|||||.|||||.||.||.||.|||||.||||||||.|||||.||..|..|
BL00537___yab 151 GATTTGTGCACAGGGAACGGGATTGTTCCGCTGCTTCTCAGCACCCGCAC 200
BSNT_00068___ 201 AAAAGCAGACAT-TCTGGGAGTCGAAATTCAAGAAAGGCTGCATGATATG 249
||||||.|.||| .|.||| ||.||||||||.|||||||||.||||.|||
BL00537___yab 201 AAAAGCCGCCATCACCGGG-GTGGAAATTCAGGAAAGGCTGTATGACATG 249
BSNT_00068___ 250 GCTGTTCGCAGCGTGGAGTATAATAAGCTGGACGATCAGATCCAGATCAT 299
||..|.|||||||||||.||.||.||.|||.|..|.|||||.| |||.|
BL00537___yab 250 GCCCTCCGCAGCGTGGAATACAACAACCTGCAAAAACAGATTC--ATCTT 297
BSNT_00068___ 300 A-CA-TGATGACCTGAAAAACATGCCGGAGAAACTTGGACATAAT----- 342
| || .||.|||||||||||.||||||.||...||.|||.|.|||
BL00537___yab 298 ATCAGGGACGACCTGAAAAATATGCCGCAGGTGCTCGGATACAATAAGGC 347
BSNT_00068___ 343 CGATATGATGTTGTCACCTGCAATCCGCCGTATTTTAAAACGCCGAAACA 392
| |||||.|||||.||||||||.||.|||||.||.||||||.||.|
BL00537___yab 348 C-----GATGTCGTCACATGCAATCCTCCTTATTTCAAGACGCCGCAAAA 392
BSNT_00068___ 393 AACTGAACAAAACATGAACGAGCATCT--CCGAATCGCAAGACATGAAAT 440
|||.||.||||||.|.||.||.|||.| || ||.||.|||||||||||
BL00537___yab 393 AACGGAGCAAAACCTAAATGAACATTTGGCC--ATTGCCAGACATGAAAT 440
BSNT_00068___ 441 CCACTGCACGCTGGAGGATGTCATTTCAGTCAGCAGCAAGCTGCTCAAGC 490
|.||||||||||.||.|||||.|||...||||||||||||||..|.||||
BL00537___yab 441 CTACTGCACGCTTGAAGATGTTATTCGCGTCAGCAGCAAGCTATTAAAGC 490
BSNT_00068___ 491 AAGGGGGAAAAGCAGCTCTTGTTCACCGGCCGGGAAGGCTTCTGGAGATT 540
|.||.||.|||...|||||.||||||||||||||.|||||.||.||.||.
BL00537___yab 491 AGGGCGGCAAACTCGCTCTCGTTCACCGGCCGGGGAGGCTGCTCGAAATC 540
BSNT_00068___ 541 TTTGAACTGATGAAGGCTTATCAAATCGAGCCAAAACGTGTACAATTTGT 590
||||||.||||||||||.|.||||||||||||.||.||.||.||||||||
BL00537___yab 541 TTTGAATTGATGAAGGCCTTTCAAATCGAGCCGAAGCGGGTCCAATTTGT 590
BSNT_00068___ 591 CTATCCGAAGCAAGGGAAAGAAGCCAATACCATTTTGGTTGAAGGTATCA 640
.||.|||||..||.|.|||||||||||.||||||||.||.|||||.||.|
BL00537___yab 591 TTACCCGAAAAAAAGCAAAGAAGCCAACACCATTTTAGTAGAAGGAATAA 640
BSNT_00068___ 641 AAGGCGGGCGTCCGGATTTAAAAATTCTTCCTCCTTTATTCGTTTATGAT 690
|||.|||.||.||.||..|.||||||.|.||||||||.||.||.||||||
BL00537___yab 641 AAGACGGCCGACCTGACCTGAAAATTTTGCCTCCTTTGTTTGTGTATGAT 690
BSNT_00068___ 691 GAACAAAATGAATATACAAAAGAAATCAGGACCATTTTATATGGAGACAA 740
||||||.||.||||||||.|.|||||.||||..|||||||||||||||.|
BL00537___yab 691 GAACAAGATCAATATACACATGAAATAAGGAAGATTTTATATGGAGACGA 740
BSNT_00068___ 741 ATAA 744
|||.
BL00537___yab 741 ATAG 744
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