Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01073 and BL00488
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence pep-align/BSNT_01073___ydjN.1.5803.seq
# -bsequence pep-align/BL00488___ydjN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01073___ydjN-BL00488___ydjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01073___ydjN-BL00488___ydjN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01073___ydjN
# 2: BL00488___ydjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 169/351 (48.1%)
# Similarity: 241/351 (68.7%)
# Gaps: 15/351 ( 4.3%)
# Score: 854.5
#
#
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BSNT_01073___ 1 MKK-RIILLLAVIIAAAA-AGVAFYVAKDKGHEKAADVSVNTESGDELLV 48
||| .::||.|||:||.| |.|.::|. |||.... ..|.:|||
BL00488___ydj 1 MKKVSVVLLAAVILAAGAFAAVRYFVP-----EKAEPAK---SGGSDLLV 42
BSNT_01073___ 49 SITDTDLLTKYYENDKVIHEEKLTSYPAFALDQKQQVLYYTGNNEQNEMR 98
||||..|:|.||||...::|||:|.|||.|||:|:::||||..:..|...
BL00488___ydj 43 SITDQKLMTAYYENQNKLYEEKMTDYPAMALDRKKRILYYTNTDNSNVKH 92
BSNT_01073___ 99 LFKLDLKSNKKTVLYKGAESADSLFLSKDRSTIYFRLGKSDESNFRIAAF 148
|.:|||:|.|||.||.|.|..|.|.||.|.|.::.|...::|.||.:|:|
BL00488___ydj 93 LIRLDLQSGKKTTLYSGDEYVDGLSLSADGSKLFMRYNLAEERNFHLASF 142
BSNT_01073___ 149 DLKTKKYKNLYPAANDQDDTVSSFFYNQKNDSFALLHYSVEEDYKKTDEA 198
|||.|.:..:||:..::|:|||.:.||:.::.|.:||||::|||:|||:|
BL00488___ydj 143 DLKQKAFHVIYPSLKNKDETVSYYQYNKADNQFVMLHYSLKEDYQKTDDA 192
BSNT_01073___ 199 NEKGIDPEPTTIHFAEGRQHKFNELKSLNQFISDIAVSDDDKRILFTSYT 248
|.||:.||||.::.:........:::::.:||:|:|:|.|.|.|:||
BL00488___ydj 193 NNKGVPPEPTNMNISMAGVKDRQKVRTIAKFINDVAISPDGKTIVFT--- 239
BSNT_01073___ 249 QKGTEQTASIQMLNADTKKYESIISNQKSFKLLIDAQPQFSKDGKNIYFL 298
:..:...:|..::|:||||::|||:|::|.|:..||||||||||.:|||
BL00488___ydj 240 -ESADDQKAIYAMDAETKKYKAIISDQQAFSLVDSAQPQFSKDGKKLYFL 288
BSNT_01073___ 299 AEAKGAKKLKDETGREAKVRTIYSYSLENKTFKKVWENPNGIINSFSVIN 348
||||.||.|:||||.||:|||||||.::.|...|.||..|||||:|:||:
BL00488___ydj 289 AEAKDAKLLEDETGSEARVRTIYSYDMDTKKVSKAWEKTNGIINTFTVID 338
BSNT_01073___ 348 - 348
BL00488___ydj 339 E 339
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