Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06280 and BL00103

See DNA alignment / Visit BSNT_06280 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence pep-align/BSNT_06280___spo0J.1.5803.seq
#    -bsequence pep-align/BL00103___spo0J.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06280___spo0J-BL00103___spo0J.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06280___spo0J-BL00103___spo0J.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06280___spo0J
# 2: BL00103___spo0J
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     232/282 (82.3%)
# Similarity:   266/282 (94.3%)
# Gaps:           0/282 ( 0.0%)
# Score: 1200.0
# 
#
#=======================================

BSNT_06280___      1 MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAEL     50
                     |.|||||||||||:.||||||||||||:.|||||||||||.|||::|.:|
BL00103___spo      1 MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDL     50

BSNT_06280___     51 KESVLQHGILQPLIVRKSLKGYDIVAGERRFRAAKLAGLDTVPAIVRELS    100
                     |||:||||:|||:|||||:|||||||||||||||:.|||:|:||||||||
BL00103___spo     51 KESILQHGVLQPIIVRKSIKGYDIVAGERRFRAAEKAGLETIPAIVRELS    100

BSNT_06280___    101 EALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRP    150
                     |:||.|||||||||||||||||||:||:|||||||:||||||||||||||
BL00103___spo    101 ESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRP    150

BSNT_06280___    151 HIANHLRLLTLPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIA    200
                     |||||||||||||::|:||..|||||||||||||||||.|||||||||::
BL00103___spo    151 HIANHLRLLTLPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVS    200

BSNT_06280___    201 EQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESYLQNYFGTTVN    250
                     |||||||||:||||||.:|||||||.:.|||||:|||||||:|||||.|.
BL00103___spo    201 EQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESYLRNYFGTPVT    250

BSNT_06280___    251 IKRQKKKGKIEIEFFSNEDLDRILELLSERES    282
                     ||:|||||:|||||:|||||:||||||::.::
BL00103___spo    251 IKKQKKKGRIEIEFYSNEDLERILELLAQEDA    282


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.