Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04404 and BL00019

See DNA alignment / Visit BSNT_04404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04404___ytaP.1.5803.seq
#    -bsequence pep-align/BL00019___ytaP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04404___ytaP-BL00019___ytaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04404___ytaP-BL00019___ytaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04404___ytaP
# 2: BL00019___ytaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     193/299 (64.5%)
# Similarity:   237/299 (79.3%)
# Gaps:           4/299 ( 1.3%)
# Score: 1062.0
# 
#
#=======================================

BSNT_04404___      1 MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKV     50
                         .|.|||:||||||.::.|...||:|||:...|:|||||||||.|.|
BL00019___yta      1 ----MRSQLFKLLGDLPGKKSIDASTLKIEEKSSFILETLLLDLNGIEAV     46

BSNT_04404___     51 PAYFVKPKKTEGPCPAVLFQHSHGGQYDRGKSELIEGADYLKTPSFSDEL    100
                     ||||.|||:..|..||||:.|||||:|:|||.||:|||:||:.|.|::||
BL00019___yta     47 PAYFAKPKQMNGKRPAVLYCHSHGGRYERGKEELVEGAEYLQAPPFAEEL     96

BSNT_04404___    101 TSLGYGVLAIDHWGFGDRRGKAESEIFKEMLLTGKVMWGMMIYDSLSALD    150
                     |:||:.|||||||.|||||||.|||||||||.||:||||||::||:.|:|
BL00019___yta     97 TALGFSVLAIDHWAFGDRRGKTESEIFKEMLWTGRVMWGMMVFDSIRAID    146

BSNT_04404___    151 YMQSRSDVQPDRIGTIGMSMGGLMAWWTAALDDRIKVCVDLCSQVDHHVL    200
                     |::.|.|:...||.::||||||||||||||||:|:.||||:|:|||...|
BL00019___yta    147 YLKMREDIDESRIASLGMSMGGLMAWWTAALDERVSVCVDICAQVDSETL    196

BSNT_04404___    201 IKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLVGVHDRLTPAE    250
                     |||||||||..|.|||.|.||||.::|:|||||||||||||..|:|||.:
BL00019___yta    197 IKTQNLDRHNLYSYVPGLVKHFSTAQIESLIAPRPHLSLVGTADKLTPVQ    246

BSNT_04404___    251 GVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVMRHEAVRFLQKWL    299
                     |:|.||::|:.||..:||.:.|.|.||.|||.|||.|||:||.||:.||
BL00019___yta    247 GIDIIEEKLSDVYIEKGAGERYEVFRSHSGHLETAGMRHKAVGFLKTWL    295


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