Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02448 and BPUM_1879
See
Amino acid alignment /
Visit
BSNT_02448 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_02448___yktD.1.24716.seq
# -bsequence dna-align/BPUM_1879.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02448___yktD-BPUM_1879.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02448___yktD-BPUM_1879.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02448___yktD
# 2: BPUM_1879
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 946
# Identity: 657/946 (69.5%)
# Similarity: 657/946 (69.5%)
# Gaps: 56/946 ( 5.9%)
# Score: 2215.0
#
#
#=======================================
BSNT_02448___ 1 ATGAGGAAAAATGAGTCCAGCTTAACGTCTCTAATTTCAGCTTTTGCCCG 50
||||.|||||||||.||.||..|.||.||..||||.||.|||||||||.|
BPUM_1879 1 ATGAAGAAAAATGAATCAAGTGTGACTTCGTTAATATCGGCTTTTGCCAG 50
BSNT_02448___ 51 TGCATATCACAGCCGATATGACACACCTCTTATTTTTGATGATTTTATCG 100
..|.|||||.||.|.||.|||.||.|||...||.|||.||||||.|.|.|
BPUM_1879 51 ATCCTATCATAGTCAATTTGATACCCCTAAAATCTTTAATGATTATTTAG 100
BSNT_02448___ 101 CAAAAGATCTCATTAACGAAAAAGAGTTTATCGACATCAGTAAAAATATG 150
|.|||||..|||||...||||||||.||.|..||.||||...||||||||
BPUM_1879 101 CCAAAGAATTCATTTCGGAAAAAGAATTCACTGAAATCAAAGAAAATATG 150
BSNT_02448___ 151 ATTCAAGGAATATCGTTTTTCAACAAAGAGATCGCCGAACGTCTTCA-AA 199
.|.|||||.|||...||.|||||||||||.||||| .|| ||
BPUM_1879 151 GTCCAAGGCATACACTTCTTCAACAAAGATATCGC---------ACAGAA 191
BSNT_02448___ 200 AT--------GATCCTGAAAAAATATTAAAATGGGTTGCACAAATCCAGC 241
|| .||.|.|||.||||||||||||||.||.|||||.||||.|
BPUM_1879 192 ATTTGAGGGAAATACAGAAGAAATATTAAAATGGATTACACAAGTCCAAC 241
BSNT_02448___ 242 TGTCTCCCACGCCCCTAG-CACGTGCTTCTTATTGTGAAAAAGTCTTGCA 290
|.||| |||..|.|||.| ||||.|||.|.||||||||||||.|.||.|.
BPUM_1879 242 TTTCT-CCAATCACCTTGTCACGAGCTGCGTATTGTGAAAAAATATTACT 290
BSNT_02448___ 291 CAACGAATTAATGCTGGGAGCAAAACAGTATGTCATTCTTGGAGCGGGGC 340
..|.||..||..|||.|||..||.|||.||.|||.|.|||||.||.||..
BPUM_1879 291 TCATGAGGTAGCGCTAGGATTAAGACAATACGTCGTACTTGGTGCTGGAT 340
BSNT_02448___ 341 TGGATACTTTCTGCTTTCGGCATCCAGAATTAGAAAACAGCTTACAGGTT 390
|.||||||||..|.|||||.|||||||||||.||||||||||||.|..|.
BPUM_1879 341 TAGATACTTTTAGTTTTCGACATCCAGAATTGGAAAACAGCTTAGAAATA 390
BSNT_02448___ 391 TTCGAGGTTGACCATCCGGCTACACAGCAATTCAAAAAAAATAAGCTGAA 440
|||||..||||.|||||.|||||||||.||||.|||||..|.|.|.||.|
BPUM_1879 391 TTCGAAATTGATCATCCCGCTACACAGGAATTTAAAAAGCAAAGGTTGGA 440
BSNT_02448___ 441 GGATGC-AAATCTGACAATTCCGGGTCATCTTCATTTTGTTCCTATGGAT 489
.||.|| |||| |.|.|||.||..||.|||||||||||.||.|||||||.
BPUM_1879 441 CGAGGCTAAAT-TAAAAATCCCAAGTAATCTTCATTTTATTTCTATGGAC 489
BSNT_02448___ 490 TTCACCAAAACGTTTTCATATGATCCTCTTTTAGATGAAGGATTTAAGAA 539
||||||||||..||.||.|||.|....||...|.||.|||||||| ||.
BPUM_1879 490 TTCACCAAAAATTTGTCCTATCAAAACCTAAAAAATAAAGGATTT--GAT 537
BSNT_02448___ 540 CACAAAA--ACATTCTTCAGCCTTCTCGGAGTGTCTTATTATGTAACACA 587
||||||| ||.||.||.||.|||.|.||.||.|||||.|||.||||..|
BPUM_1879 538 CACAAAAAGACGTTTTTTAGTCTTTTAGGTGTTTCTTACTATTTAACGAA 587
BSNT_02448___ 588 GGAAGAAAATGCAAGCTTGATAAGCAATTTATTTTCTCATGTCCCGCCTG 637
.||.|||..|.|||||||.|||....|||||||..|..|.||.||..|.|
BPUM_1879 588 AGAGGAAGTTTCAAGCTTAATAGATGATTTATTCACCAAGGTTCCATCAG 637
BSNT_02448___ 638 GAAGCTCTATTGTTTTTGATTATGCGGACGAAACACTTTTTACAGCAAAA 687
||||.||.||.||||||||||||||.|||||||..||.||...||.||||
BPUM_1879 638 GAAGTTCGATCGTTTTTGATTATGCAGACGAAAATCTATTCGAAGAAAAA 687
BSNT_02448___ 688 GGGACGTCGAATCGAGTTGAACATATGGTGAAGATGGCTGCCGCAAGCGG 737
||.|..||.|||.||||||||.||||||||||.||||||.|...|.|.||
BPUM_1879 688 GGAATCTCTAATAGAGTTGAAAATATGGTGAAAATGGCTTCAATAGGAGG 737
BSNT_02448___ 738 GGAACCGATGAAATCATGTTT----CACTTATCAAGAGATTGAACATCTG 783
.|||||||||||||||||||| .|||| .||.||.|||.|..||
BPUM_1879 738 AGAACCGATGAAATCATGTTTTTCGTACTT----TGAAATCGAAAAAATG 783
BSNT_02448___ 784 TTAGAGTCATCTGGTTTACTGATCTATGAACATCTATCACCAGACGACAT 833
|||||...|||.|.||||||.||.|||||||||.|||||||.||..|..|
BPUM_1879 784 TTAGAAAAATCAGATTTACTTATTTATGAACATTTATCACCTGAAAAAGT 833
BSNT_02448___ 834 CAATGACCTTTTCTTTAGTAATCGAAAAGACAATTTGTCAGCGTTTGAAA 883
.|||||.||.|..||||..|||.||.||||..|..|||||||.|||||.|
BPUM_1879 834 GAATGAACTGTATTTTAACAATAGAGAAGATGACCTGTCAGCTTTTGAGA 883
BSNT_02448___ 884 CGATTCATTATATTCATGCGGTCACTAGTGTTGCATAA-------- 921
|.||||||||.|||||||| .||||
BPUM_1879 884 CCATTCATTACATTCATGC--------------TATAAAAAAATAA 915
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.