Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05890 and RBAM_035700

See DNA alignment / Visit BSNT_05890 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:24
# Commandline: needle
#    -asequence pep-align/BSNT_05890.1.9828.seq
#    -bsequence pep-align/RBAM_035700.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05890-RBAM_035700.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05890-RBAM_035700.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05890
# 2: RBAM_035700
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 51
# Identity:      33/51 (64.7%)
# Similarity:    42/51 (82.4%)
# Gaps:           2/51 ( 3.9%)
# Score: 199.0
# 
#
#=======================================

BSNT_05890         1 --MLQLMKQLYEKPAVKWTCHTGFYLMILLVLFFMYGFHTANTGSYIYND     48
                       |:|.:|:.||...:|||.|||||.:||::||:||||||||||:|||||
RBAM_035700        1 MNMMQKLKRAYENTLIKWTFHTGFYFLILVLLFWMYGFHTANTGTYIYND     50

BSNT_05890        49 F     49
                     |
RBAM_035700       51 F     51


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