Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05780 and RBAM_034980

See DNA alignment / Visit BSNT_05780 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:17
# Commandline: needle
#    -asequence pep-align/BSNT_05780___rocA.1.9828.seq
#    -bsequence pep-align/RBAM_034980___rocA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05780___rocA-RBAM_034980___rocA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05780___rocA-RBAM_034980___rocA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05780___rocA
# 2: RBAM_034980___rocA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 515
# Identity:     460/515 (89.3%)
# Similarity:   495/515 (96.1%)
# Gaps:           0/515 ( 0.0%)
# Score: 2418.0
# 
#
#=======================================

BSNT_05780___      1 MTVTYAHEPFTDFTEAKNKTAFGESLAFVNTQLGKHYPLVINGEKIETDR     50
                     |||:|||||||:|.|..||.:|.|:||:||:||||||||:||||.||||:
RBAM_034980__      1 MTVSYAHEPFTNFQEETNKQSFQEALAYVNSQLGKHYPLIINGEAIETDK     50

BSNT_05780___     51 KIISINPANKEEIIGYASTADQELAEKAMQAALQAFDSWKKQRPEHRANI    100
                     ||||:|||:|:|:||..|.|.:||||||||||||||.:|||.|||||||:
RBAM_034980__     51 KIISVNPADKKEVIGSVSAAGKELAEKAMQAALQAFQTWKKVRPEHRANV    100

BSNT_05780___    101 LFKAAAILRRRKHEFSSYLVKEAGKPWKEADADTAEAIDFLEFYARQMLK    150
                     |||||||:||||||||:|||||||||||||||||||||||||:|||||||
RBAM_034980__    101 LFKAAAIIRRRKHEFSAYLVKEAGKPWKEADADTAEAIDFLEYYARQMLK    150

BSNT_05780___    151 LKEGAPVKSRAGEFNQYHYEALGVGIVISPFNFPLAIMAGTAAAAIVTGN    200
                     ||:|:|||||.||:|||||:.|||||||||||||||||||||||||||||
RBAM_034980__    151 LKDGSPVKSRDGEYNQYHYKPLGVGIVISPFNFPLAIMAGTAAAAIVTGN    200

BSNT_05780___    201 TILLKPADAAPVVAAKFVEVMEEAGLPNGVLNYIPGDGAEIGDFLVEHPK    250
                     |||||||||||||||||||||:|||||:|||.:|||||.||||:||||||
RBAM_034980__    201 TILLKPADAAPVVAAKFVEVMKEAGLPDGVLQFIPGDGGEIGDYLVEHPK    250

BSNT_05780___    251 TRFVSFTGSRAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDKDAD    300
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_034980__    251 TRFVSFTGSRAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDRDAD    300

BSNT_05780___    301 LDLAASSIVYSAFGYSGQKCSAGSRAVIHQDVYDEVVEKAVALTKTLTVG    350
                     ||||||||||||||:||||||||||||||||||||||||||||||:||||
RBAM_034980__    301 LDLAASSIVYSAFGFSGQKCSAGSRAVIHQDVYDEVVEKAVALTKSLTVG    350

BSNT_05780___    351 NPEDPDTYMGPVIHEASYNKVMKYIEIGKSEGKLLAGGEGDDSKGYFIQP    400
                     :|||.|||||||||||||||||:||||||:|||||.||||||||||||||
RBAM_034980__    351 SPEDFDTYMGPVIHEASYNKVMRYIEIGKTEGKLLTGGEGDDSKGYFIQP    400

BSNT_05780___    401 TIFADVDENARLMQEEIFGPVVAICKARDFDHMLEIANNTEYGLTGALLT    450
                     ||||||||||||||||||||||||.|||||||||||||||:||||||||:
RBAM_034980__    401 TIFADVDENARLMQEEIFGPVVAISKARDFDHMLEIANNTDYGLTGALLS    450

BSNT_05780___    451 KNRAHIERAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAGGPD    500
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034980__    451 KTRAHIERAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAGGPD    500

BSNT_05780___    501 YLILHMQAKTTSEAF    515
                     ||||||||||||||:
RBAM_034980__    501 YLILHMQAKTTSEAY    515


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