Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05774 and RBAM_034920

See DNA alignment / Visit BSNT_05774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:16
# Commandline: needle
#    -asequence pep-align/BSNT_05774___ywfC.1.9828.seq
#    -bsequence pep-align/RBAM_034920___bacB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05774___ywfC-RBAM_034920___bacB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05774___ywfC-RBAM_034920___bacB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05774___ywfC
# 2: RBAM_034920___bacB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     211/237 (89.0%)
# Similarity:   228/237 (96.2%)
# Gaps:           2/237 ( 0.8%)
# Score: 1158.0
# 
#
#=======================================

BSNT_05774___      1 -MKTKEDMQELYFPTPKLIEWENGVRQYSTVRGDTEVLMSYVPPHTNVEP     49
                      |||::|:|||||||||||||:|||||||:||||||||:|||||||||||
RBAM_034920__      1 MMKTEQDLQELYFPTPKLIEWDNGVRQYSSVRGDTEVLLSYVPPHTNVEP     50

BSNT_05774___     50 HQHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQ     99
                     |||||||||:||||||.|||||||||||||||||||||:|||||||:|||
RBAM_034920__     51 HQHKEVQIGLVVSGELSMTVGDVTRKMTALESAYIAPPNVPHGARNETDQ    100

BSNT_05774___    100 EVIAIDIKRLKADETYTSPEDYFLDIFKTRDLLPGMEVTFFVEDWVEIML    149
                     ||||||||||||.|||||||||||:|||||||||||||||||||||||||
RBAM_034920__    101 EVIAIDIKRLKAGETYTSPEDYFLNIFKTRDLLPGMEVTFFVEDWVEIML    150

BSNT_05774___    150 AKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPR    199
                     |.|||||||||||||||||||||||||||||:|||.|:|.|||||||:||
RBAM_034920__    151 ANIPGNGGEMPFHKHRNEQIGICIGGGYDMTIEGCKVDMTFGTAYFCDPR    200

BSNT_05774___    200 EDHGAINRSEKESKSINIFFPPRYNRAKAKKMKADE-    235
                     ||||||||.||:|||:|||||||||||||||::|.| 
RBAM_034920__    201 EDHGAINRFEKDSKSVNIFFPPRYNRAKAKKLEAKES    237


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