Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05733 and RBAM_034620
See
DNA alignment /
Visit
BSNT_05733 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_05733___speE.1.9828.seq
# -bsequence pep-align/RBAM_034620___speE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05733___speE-RBAM_034620___speE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05733___speE-RBAM_034620___speE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05733___speE
# 2: RBAM_034620___speE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity: 263/276 (95.3%)
# Similarity: 274/276 (99.3%)
# Gaps: 0/276 ( 0.0%)
# Score: 1401.0
#
#
#=======================================
BSNT_05733___ 1 MSELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDG 50
|||||||||||||||||:||.:||||||||||||||||||||||||||||
RBAM_034620__ 1 MSELWYTEKQTKNFGITLKVKQTLHTEQTEFQHLEMVETEEFGNMLFLDG 50
BSNT_05733___ 51 MVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSV 100
||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_034620__ 51 MVMTSEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREILKHPSV 100
BSNT_05733___ 101 KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQY 150
||||||||||||||||||||||||||||||||||:|||||||||||||:|
RBAM_034620__ 101 KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVRVDDGFMHIAKSENEY 150
BSNT_05733___ 151 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELI 200
||||||||||||||||||:|||||||:|||||||||||||||||||||||
RBAM_034620__ 151 DVIMVDSTEPVGPAVNLFSKGFYAGISKALKEDGIFVAQTDNPWFTPELI 200
BSNT_05733___ 201 TNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKYDPLAVEDSRFFD 250
||||||||||||||:||||||||||||||||||||||||||.||||||||
RBAM_034620__ 201 TNVQRDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKYDPLEVEDSRFFD 250
BSNT_05733___ 251 IETKYYTKDIHKAAFVLPKFVSDLIK 276
|:||||||::||||||||||||||||
RBAM_034620__ 251 IDTKYYTKELHKAAFVLPKFVSDLIK 276
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.