Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05506 and RBAM_033270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05506___ywrD.1.9828.seq
# -bsequence pep-align/RBAM_033270___ywrD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05506___ywrD-RBAM_033270___ywrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05506___ywrD-RBAM_033270___ywrD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05506___ywrD
# 2: RBAM_033270___ywrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity: 421/525 (80.2%)
# Similarity: 466/525 (88.8%)
# Gaps: 0/525 ( 0.0%)
# Score: 2240.0
#
#
#=======================================
BSNT_05506___ 1 MNRSVIGTKQMVVSPHYLASQAGNRILDKGGNAFDAAVAVSACLAVVYPH 50
||.|.||||||||||||||||||..||:||||||||||||||||||||||
RBAM_033270__ 1 MNTSTIGTKQMVVSPHYLASQAGAGILEKGGNAFDAAVAVSACLAVVYPH 50
BSNT_05506___ 51 MTGLGGDSFWLTFHQETKAVKVYNGSGRSGKNVTRDVYKGKSAIPLRGID 100
||||||||||||:|:||..:|.|||||||||:||||:|:|:.||||||.:
RBAM_033270__ 51 MTGLGGDSFWLTYHKETGRIKAYNGSGRSGKHVTRDLYRGREAIPLRGTE 100
BSNT_05506___ 101 SAITVPGMVDSWDAVLKEYGRLSLADVLEPARDYAQNGFPVSADQCRHTE 150
||||||||.|||||||..|||||||:||:||.|||.||||||||||.|||
RBAM_033270__ 101 SAITVPGMADSWDAVLSAYGRLSLAEVLKPALDYAANGFPVSADQCAHTE 150
BSNT_05506___ 151 KNIELLASTPYTADIFTRRGKAPVPGERFLQKELADSLNVIAEKGRSAFY 200
:|:.||||.|||:.||||..|||:|||||:||:||.||..:|||||||||
RBAM_033270__ 151 RNLALLASMPYTSAIFTRNKKAPMPGERFVQKDLAASLEQLAEKGRSAFY 200
BSNT_05506___ 201 EGDLAQRIVSHLQNNGSYMTIDDFKAHRGEWAAPVSSDYRGYSVYQAPPN 250
||||||||.|.||||||.:|:||||||||||..||||||||..:||||||
RBAM_033270__ 201 EGDLAQRITSFLQNNGSRLTLDDFKAHRGEWTNPVSSDYRGCKIYQAPPN 250
BSNT_05506___ 251 SQGFTGLLTLNILENYDFTQIEHGSFEYYHVLVEALKKSFVDRNAFLTDP 300
|||||||:||||||||||:|||||||:|||:|:|||||||:.||..||||
RBAM_033270__ 251 SQGFTGLMTLNILENYDFSQIEHGSFDYYHLLIEALKKSFLHRNEVLTDP 300
BSNT_05506___ 301 AFADIPLERLLDKNYAKRLAGEIGYLAEPAESRPVGSDTAYAAVIDADGN 350
||:.|||:|||||.|||:||.|||.:|.||.|||||||||||||.||:||
RBAM_033270__ 301 AFSHIPLDRLLDKRYAKQLAEEIGNVAAPAVSRPVGSDTAYAAVADAEGN 350
BSNT_05506___ 351 AVSFIQSLYFEFGSAVTAGDTGILLQNRGSFFSLDENHVNTLEPRKRTFH 400
|||||||||||||||||||:||||||||||||||||:|||||||.|||||
RBAM_033270__ 351 AVSFIQSLYFEFGSAVTAGETGILLQNRGSFFSLDESHVNTLEPGKRTFH 400
BSNT_05506___ 401 TLMPAMVCKGGKPKILYGTQGGEGQPQTQTAIITRMLDYGMHPQQAISEP 450
||||||.||.|||.|||||||||||||||||:|||::||.|.|||||:||
RBAM_033270__ 401 TLMPAMACKEGKPHILYGTQGGEGQPQTQTAMITRIIDYKMDPQQAINEP 450
BSNT_05506___ 451 RWVWGRTWGEEYEGLRVEGRFTDKTIQKLKDSGHLVEVVGDYDPLMGQAA 500
||||||||||||||||||.|.:.:|.:.|:.|||.||.|||:|.|||.||
RBAM_033270__ 451 RWVWGRTWGEEYEGLRVESRISPETREALRQSGHRVETVGDFDGLMGHAA 500
BSNT_05506___ 501 AIKVDEEGFLQGGADPRGDGAAVGI 525
||.:|||||||||.||||||||.|:
RBAM_033270__ 501 AIVIDEEGFLQGGTDPRGDGAAAGV 525
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